RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 LRP3O75074 770 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 GLI4P10075 376 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 SPP1P10451 314 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 GABRR1P24046 479 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 BLVRBP30043 206 aaPredicted RBP11.48□□□□□ -0.57
CTNS-201ENST00000046640 RAC1P63000 192 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 CSNK2A1P68400 391 aaPredicted RBP11.48□□□□□ -0.57
CTNS-201ENST00000046640 SRSF4Q08170 494 aaKnown RBP11.48□□□□□ -0.57
CTNS-201ENST00000046640 PDZK1IP1Q13113 114 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 BRICD5Q6PL45 260 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 HOGA1Q86XE5 327 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 PNLDC1Q8NA58 520 aaKnown RBP11.48□□□□□ -0.57
CTNS-201ENST00000046640 CT55Q8WUE5 264 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 DOCK7Q96N67 2140 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 FAM230AA0A1W2PPH8 454 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 YKT6O15498 198 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 SCGB1D2O95969 90 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 CBR1P16152 277 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 HIST1H1DP16402 221 aaKnown RBP11.47□□□□□ -0.57
CTNS-201ENST00000046640 PTGFRP43088 359 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 TMEM128Q5BJH2 165 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 CDCP2Q5VXM1 449 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 RPL7L1Q6DKI1 246 aaKnown RBP11.47□□□□□ -0.57
CTNS-201ENST00000046640 CSNK2A3Q8NEV1 391 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 OR5H2Q8NGV7 314 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 ZNF701Q9NV72 531 aaPredicted RBP11.47□□□□□ -0.57
CTNS-201ENST00000046640 UQCC1Q9NVA1 299 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 NCKAP5O14513 1909 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 DNAJC13O75165 2243 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 TEX13DA0A0J9YY54 714 aaPredicted RBP11.47□□□□□ -0.57
CTNS-201ENST00000046640 A0A1B0GV50 99 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 MED19A0JLT2 244 aaPredicted RBP11.47□□□□□ -0.57
CTNS-201ENST00000046640 RAB19A4D1S5 217 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 C19orf67A6NJJ6 358 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 SPRY1O43609 319 aaPredicted RBP11.47□□□□□ -0.57
CTNS-201ENST00000046640 MED6O75586 246 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 CRYBA1P05813 215 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 MUC1P15941 1255 aaPredicted RBP11.47□□□□□ -0.57
CTNS-201ENST00000046640 RGS19P49795 217 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 HGFACQ04756 655 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 KCNMB1Q16558 191 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 ACER2Q5QJU3 275 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 STOML3Q8TAV4 291 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 ABHD3Q8WU67 409 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 TMEM54Q969K7 222 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 S100A13Q99584 98 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 HDHD3Q9BSH5 251 aaPredicted RBP11.47□□□□□ -0.57
CTNS-201ENST00000046640 SH2D2AQ9NP31 389 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 COA4Q9NYJ1 87 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 EHFQ9NZC4 300 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 NDRG3Q9UGV2 375 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 FLVCR1Q9Y5Y0 555 aa11.47□□□□□ -0.57
CTNS-201ENST00000046640 LOC102725191A0A1B0GVB3 256 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 ACKR3P25106 362 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 GDF1P27539 372 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 LSM6P62312 80 aaKnown RBP11.46□□□□□ -0.57
CTNS-201ENST00000046640 TRA2AQ13595 282 aaKnown RBP eCLIP11.46□□□□□ -0.57
CTNS-201ENST00000046640 PDCD1Q15116 288 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 C6orf201Q7Z4U5 140 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 FGFBP3Q8TAT2 258 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 RXFP4Q8TDU9 374 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 SGK3Q96BR1 496 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 HES7Q9BYE0 225 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 OR10A2Q9H208 303 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 RHOFQ9HBH0 211 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 P4HTMQ9NXG6 502 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 ZNF407Q9C0G0 2248 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 FREM1Q5H8C1 2179 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 DOCK10Q96BY6 2186 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 ARPC4-TTLL3A0A0A6YYG9 625 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 PRSS44E7EML9 344 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 FGF16O43320 207 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 LCATP04180 440 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 TMEM225BP0DP42 221 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 CD80P33681 288 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 RAB13P51153 203 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 ZNF84P51523 738 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 OR2A2Q6IF42 318 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 CRIP3Q6Q6R5 217 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 UQCC3Q6UW78 93 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 RAB11FIP2Q7L804 512 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 C20orf196Q8IYI0 205 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 OR10D3Q8NH80 312 aa11.46□□□□□ -0.57
CTNS-201ENST00000046640 DHRS3O75911 302 aa11.46□□□□□ -0.58
CTNS-201ENST00000046640 JMJD7P0C870 316 aa11.46□□□□□ -0.58
CTNS-201ENST00000046640 FAM157CP0CG43 387 aa11.46□□□□□ -0.58
CTNS-201ENST00000046640 HOXB1P14653 301 aaPredicted RBP11.46□□□□□ -0.58
CTNS-201ENST00000046640 HLA-GP17693 338 aa11.46□□□□□ -0.58
CTNS-201ENST00000046640 B3GALT5-AS1P59052 145 aa11.46□□□□□ -0.58
CTNS-201ENST00000046640 SUPT4H1P63272 117 aaKnown RBP11.46□□□□□ -0.58
CTNS-201ENST00000046640 MST1LQ2TV78 715 aa11.46□□□□□ -0.58
CTNS-201ENST00000046640 SLC23A3Q6PIS1 610 aa11.46□□□□□ -0.58
CTNS-201ENST00000046640 AAED1Q7RTV5 226 aa11.46□□□□□ -0.58
CTNS-201ENST00000046640 OR13G1Q8NGZ3 307 aa11.46□□□□□ -0.58
CTNS-201ENST00000046640 FOXD3Q9UJU5 478 aaPredicted RBP11.46□□□□□ -0.58
CTNS-201ENST00000046640 GPR132Q9UNW8 380 aa11.46□□□□□ -0.58
CTNS-201ENST00000046640 DBX1A6NMT0 343 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 SGCEO43556 437 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 VAMP5O95183 116 aa11.45□□□□□ -0.58
CTNS-201ENST00000046640 SFT2D2O95562 160 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms