RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Ly6g6dQ9Z1Q3 135 aa11.78□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Gm4131A0A140LJ24 318 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Prr23a2D3YWX5 253 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Wscd2D4PHA7 571 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Zmat3O54836 290 aaKnown RBP11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Lmx1bO88609 395 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 RradO88667 308 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 H1f0P10922 194 aaKnown RBP11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Dnase2P56542 353 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 CcnjQ3TZI6 379 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Pafah1b3Q61205 232 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Olfr1061Q7TR72 313 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Olfr851Q7TRG0 312 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Otop1Q80VM9 600 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Cdk3Q80YP0 303 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Bhlhe23Q8BGW3 223 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Ube3dQ8BX13 368 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Slc38a1Q8K2P7 485 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Klhl25Q8R2P1 589 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Fcrl1Q8R4Y0 343 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Sco2Q8VCL2 255 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Acer2Q8VD53 275 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Olfr780Q8VEU0 312 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Olfr1466Q8VFW4 310 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Exosc4Q921I9 245 aaKnown RBP11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Q9CWB7 115 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 MmabQ9D273 237 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Samd8Q9DA37 478 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Phf7Q9DAG9 307 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Galnt16Q9JJ61 558 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 NmuQ9QXK8 174 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Insl6Q9QY05 191 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Jag2Q9QYE5 1247 aa11.77□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Gm10358A0A1D5RLD8 333 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Vmn1r124D3YTX4 307 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Gm8220F6YKI2 213 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Gm3033M0QWI0 180 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Gm3532M0QWL4 194 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 FgrP14234 517 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 GapdhP16858 333 aaKnown RBP11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Pnliprp2P17892 482 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Zfp36l2P23949 484 aaKnown RBP11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Mbl2P41317 244 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Rap2bP61226 183 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Col9a1Q05722 921 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Cggbp1Q8BHG9 167 aaKnown RBP11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Gpr137bQ8BNQ3 385 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Arf2Q8BSL7 181 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 MetrnQ8C1Q4 291 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Akr1c18Q8K023 323 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Glb1lQ8VC60 646 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Olfr1110Q8VG38 312 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 QprtQ91X91 299 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 B3galnt1Q920V1 331 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Nrif2Q921B4 824 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 PsenenQ9CQR7 101 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 SigirrQ9JLZ8 409 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Gm3839S4R1W1 333 aa11.77□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 4930402F06RikA2AUQ8 332 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Vmn2r49D3Z6L3 852 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Gm8020F6WLE9 229 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Gm9772F6XPD8 135 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Vmn2r32K7N686 852 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Vmn2r42O35192 852 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 RrhO35214 337 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Il10P18893 178 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Camk2bP28652 542 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Fabp2P55050 132 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 UcnP81615 122 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Thbs3Q05895 956 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Tmem104Q3TB48 496 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Ccdc190Q3URK1 288 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Wdr34Q5U4F6 535 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Olfr11Q60890 313 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 NppcQ61839 126 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 CebpzosQ8BTE5 80 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 SccpdhQ8R127 429 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Vmn1r220Q8R272 298 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Q8R2K8 148 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Ppp1r14cQ8R4S0 164 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Znf385aQ8VD12 386 aaKnown RBP11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Calhm2Q8VEC4 323 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Tmem144Q8VEH0 348 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Olfr60Q8VGL4 311 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 NifkQ91VE6 317 aaKnown RBP11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 MrgprgQ91ZB5 289 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Slc33a1Q99J27 550 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Park7Q99LX0 189 aaKnown RBP11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Mrpl49Q9CQ40 166 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Mpped2Q9CZJ0 294 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 FtmtQ9D5H4 237 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 AplfQ9D842 499 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Emc9Q9DB76 206 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Psma1Q9R1P4 263 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Ints1Q6P4S8 2195 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 SvilQ8K4L3 2170 aa11.76□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Gm28961A0A087WPA5 222 aa11.75□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Gm21858A0A087WQ24 222 aa11.75□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Trbv23A0A0A6YWQ1 115 aa11.75□□□□□ -0.53
Pdlim5-208ENSMUST00000196220 Mtg2A2AFK4 405 aa11.75□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 53.7 ms