RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Srxn1Q9D975 136 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Stard5Q9EPQ7 213 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Clec6aQ9JKF4 209 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Nkain4Q9JMG4 208 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Spint2Q9WU03 252 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Bcl3Q9Z2F6 448 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Clec4dQ9Z2H6 219 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Wdfy1E9Q4P1 410 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Vmn1r103K7N6X7 305 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Vmn1r122K7N726 305 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Vmn1r151L7N288 305 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 GamtO35969 236 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Gfi1bO70237 330 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 FgrP14234 517 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Hoxc4Q08624 264 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Tacstd2Q8BGV3 317 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Abhd6Q8R2Y0 336 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Lpcat3Q91V01 487 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Pcbd2Q9CZL5 136 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 MtfmtQ9D799 386 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Actl6aQ9Z2N8 429 aaKnown RBP10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Gm26992S4R1A3 76 aa10.33□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Gm5458L7N219 204 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Ccl20O89093 97 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Uck1P52623 277 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Ear2P97425 156 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Olfr9Q60885 312 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Znf629Q6A085 867 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Glt8d1Q6NSU3 371 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Olfr527Q7TRT9 305 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Kiaa1456Q80WQ4 447 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 CblcQ80XL1 496 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Pck2Q8BH04 640 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Synpo2lQ8BWB1 975 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Rasgef1bQ8JZL7 473 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 RabepkQ8VCH5 380 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Olfr1254Q8VFB1 314 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 SdhbQ9CQA3 282 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 D930007J09RikQ9D2K6 131 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Acot12Q9DBK0 556 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Riox1Q9JJF3 603 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Dock4P59764 1978 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Spta1P08032 2415 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Trav12-2A0N8N6 114 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Ccdc9bA3KGF9 545 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Vmn1r124D3YTX4 307 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 SpxD3Z752 116 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Zfp961E9Q4R5 444 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Slc17a3G3UWD9 498 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Gm21818J3KMS6 170 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Zfp955bL7N232 545 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Gm773Q3TML4 206 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Negr1Q80Z24 348 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Clvs2Q8BG92 327 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Fam53bQ8BGR5 422 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Wdr48Q8BH57 676 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Mob3cQ8BJG4 216 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Neil1Q8K4Q6 389 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Olfr992Q8VGC6 309 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Olfr1008Q8VGC7 313 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Cela1Q91X79 266 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Tmem42Q9CR22 157 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Arl5bQ9D4P0 179 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Wdr20Q9D5R2 567 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Sec61a2Q9JLR1 476 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Wrap73Q9JM98 462 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Bex3Q9WTZ9 124 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Zfp944E9PUS4 492 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Gm10260F6YVP7 152 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Bbip1J3QMK2 67 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Efna4O08542 206 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Grcc10O35127 126 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Slc6a18O88576 615 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 MyogP12979 224 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Hist1h1cP15864 212 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Galr1P56479 348 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Ypel5P62700 121 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Gm1123Q1RME4 390 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 TrmoQ562D6 431 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Taar8cQ5QD05 344 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Scarb1Q61009 509 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Vmn1r28Q8R2C9 302 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Olfr919Q8VF78 315 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Slc33a1Q99J27 550 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Hsbp1Q9CQZ1 76 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Dram2Q9CR48 267 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 9230104L09RikQ9D264 133 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 2900055J20RikQ9D6G3 140 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Olfr887Q9EQA6 309 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 MokQ9WVS4 420 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Unc119Q9Z2R6 240 aa10.32□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Gm21488A0A087WR99 222 aa10.31□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Gm15737D3YZR0 106 aa10.31□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Klf16P58334 251 aa10.31□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Rhox4fQ2MDF8 205 aa10.31□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Rhox4cQ2MDG1 205 aa10.31□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Tmem104Q3TB48 496 aa10.31□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Mfsd4b3Q3UN21 355 aa10.31□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Fstl4Q5STE3 841 aa10.31□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Mc2rQ64326 296 aa10.31□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 47.7 ms