RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Psmb1O09061 240 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Lin7bO88951 207 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Agtr1bP29755 359 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Eif4eP63073 217 aaKnown RBP7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Gm6760Q0ZNK3 87 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Gpank1Q61858 372 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 2210407C18RikQ6YI28 220 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Tas2r3Q7TQA7 316 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Trmt61aQ80XC2 290 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Slc25a16Q8C0K5 332 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 YbeyQ8CAV0 164 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Rdh9Q8K5C8 317 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Sla2Q8R4L0 259 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Ppp1r14cQ8R4S0 164 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Zmynd11Q8R5C8 602 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr780Q8VEU0 312 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr272Q8VGA0 319 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr578Q8VH17 313 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 NpntQ91V88 561 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Il24Q925S4 181 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Arrdc2Q9D668 407 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Asb12Q9D738 308 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Tlr1Q9EPQ1 795 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Slc15a1Q9JIP7 709 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Clec4eQ9R0Q8 214 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Mmp16Q9WTR0 607 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Kmt2bO08550 2713 aa7.62□□□□□ -1.19
Trim39-201ENSMUST00000042717 Gm20695H3BLK7 282 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Gm3696K7N751 203 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Sh2b3O09039 548 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 C9P06683 548 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Lyl1P27792 278 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Efna2P52801 209 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Hes5P70120 167 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Ankrd33bQ3U0L2 486 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Crtc2Q3U182 692 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Gm1527Q3V0P3 650 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Grb2Q60631 217 aaKnown RBP7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Klf3Q60980 344 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Cd55bQ61476 407 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Hes3Q61657 175 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Frem1Q684R7 2191 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Pcp4l1Q6W8Q3 68 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr479Q7TRV1 327 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Kazald1Q8BJ66 313 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Sirt7Q8BKJ9 402 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Mrps23Q8VE22 177 aaKnown RBP7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Cmtm2aQ9DAR1 169 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Neu3Q9JMH7 418 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Fam89bQ9QUI1 189 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Srsf10Q9R0U0 262 aaKnown RBP7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Zfp111Q9R164 701 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 AcacbE9Q4Z2 2448 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Btbd35f21A0A140T8Q5 498 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr721-ps1A0A140T8T9 324 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Sdccag3A2AIW0 432 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr1107A2AVB8 312 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 I0C0044D17RikA6PWL3 169 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Slc18b1D3Z5L6 459 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Vmn1r7E9Q8T0 311 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Btbd35f22J3QN64 498 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Capn1O35350 713 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Foxl2O88470 375 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 JtbO88824 146 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 UbcP0CG50 734 aaKnown RBP7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Il10P18893 178 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Bcl2l2P70345 193 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Rab42Q0PD08 215 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 6430531B16RikQ3V2J1 307 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Tas2r113Q7M711 309 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Ldoc1Q7TPY9 151 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Zer1Q80ZJ6 779 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Coro2bQ8BH44 480 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Rab39aQ8BHD0 217 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 ArsjQ8BM89 598 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Tox4Q8BU11 619 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 NdnfQ8C119 568 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr1217Q8VGG1 304 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Eps8l3Q91WL0 600 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Exosc8Q9D753 276 aaKnown RBP7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 GltpQ9JL62 209 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Creb3l1Q9Z125 519 aa7.61□□□□□ -1.19
Trim39-201ENSMUST00000042717 Gm35060A0A140LIV7 231 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Tex38A2A8T7 201 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Gm5901D3YVJ1 333 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Vmn1r68E9Q0V3 319 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Gm6401L7N2C0 213 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Ear3O35290 156 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Tp63O88898 680 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Ccl20O89093 97 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 St8sia5P70126 412 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Map2k6P70236 334 aaKnown RBP7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Macrod2Q3UYG8 475 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Ppp5cQ60676 499 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Ppp3r1Q63810 170 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Coq3Q8BMS4 370 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 MastlQ8C0P0 865 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Klk14Q8CGR5 250 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Klf11Q8K1S5 502 aa7.6□□□□□ -1.19
Trim39-201ENSMUST00000042717 Fam110aQ8R184 296 aa7.6□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 56 ms