RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Ccdc9bA3KGF9 545 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 CtsbP10605 339 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Tmem104Q3TB48 496 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Gm773Q3TML4 206 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Tmprss7Q8BIK6 829 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Colec10Q8CF98 277 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr788Q8VFI0 311 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr862Q8VFJ1 306 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr828Q8VFM8 312 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr676Q8VGZ9 317 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Nt5dc2Q91X76 390 aaKnown RBP14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Nrif2Q921B4 824 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Hsbp1Q9CQZ1 76 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Wdsub1Q9D0I6 474 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Chchd2Q9D1L0 153 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Twsg1Q9EP52 222 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Reep6Q9JM62 201 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Adam10O35598 749 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Phox2aQ62066 280 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Znf511Q6P0X2 227 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Sat2Q6P8J2 170 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr205Q7TS37 305 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Gpr89aQ8BS95 455 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Srpx2Q8R054 468 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Atp5sQ9CRA7 200 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Rad1Q9QWZ1 280 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Dmxl2Q8BPN8 3032 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Wdr90Q6ZPG2 1874 aa14.48□□□□□ -0.09
Trim28-201ENSMUST00000005705 Macc1E9PXX8 851 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Igf2P09535 180 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 KitlgP20826 273 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Zdhhc8Q5Y5T5 762 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 2610318N02RikQ80VT5 305 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Zfp790Q80ZX2 779 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Lrp12Q8BUJ9 858 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Synpo2lQ8BWB1 975 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Mitd1Q8VDV8 249 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr1497Q8VG11 314 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 QprtQ91X91 299 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Rtn4rQ99PI8 473 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Carhsp1Q9CR86 148 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Aurkaip1Q9DCJ7 200 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Mllt1Q9ERL0 547 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Ssna1Q9JJ94 119 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Ralgapa1Q6GYP7 2035 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Sdk2Q6V4S5 2176 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Igkv9-124A0A0G2JDR3 117 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Htra4A2RT60 483 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Gm9047B9EJX3 177 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Gm4177D3YTX5 305 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Vmn1r127K7N6J5 305 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Vmn1r142K7N6U0 305 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Vmn1r159K7N701 305 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 HckP08103 524 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Zfp157Q6PCM4 567 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Kiaa1456Q80WQ4 447 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 CblcQ80XL1 496 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 BivmQ8CBX9 502 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Esco2Q8CIB9 592 aaKnown RBP14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Uqcr10Q8R1I1 64 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Vmn1r229Q8R2A9 306 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Plp2Q9R1Q7 152 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 PthQ9Z0L6 115 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 RelnQ60841 3461 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 BC048679D3YXE9 172 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Vmn2r107E9PZJ7 861 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Gm42421F6X8D5 166 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Id4P41139 161 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 March1Q6NZQ8 289 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Commd1Q8K4M5 188 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Abhd14bQ8VCR7 210 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr1122Q8VGT9 326 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Cacng5Q8VHW4 275 aa14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Ldb3Q9JKS4 723 aaKnown RBP14.47□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr557E9Q550 322 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr1348F6VB59 318 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 mt-Co3P00416 261 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 Bmp8aP34821 399 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 Tmem14aP56983 99 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 SnrpeP62305 92 aaKnown RBP14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 Rnf133Q14B02 382 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 Arhgap9Q1HDU4 648 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 TrmoQ562D6 431 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr714Q7TRN0 317 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 Tacstd2Q8BGV3 317 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 Crb3Q8QZT4 113 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 CsprsQ99388 208 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 Tmem138Q9D6G5 162 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr888Q9EQA5 314 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr887Q9EQA6 309 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 Tspan15F7BWT7 294 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 Gm8660K7N6J2 305 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 CfdP03953 259 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 Hbb-bh1P04444 147 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 Zfp11P10751 647 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 GlulP15105 373 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 RoraP51448 523 aa14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 Rps4xP62702 263 aaKnown RBP14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 ElocP83940 112 aaKnown RBP14.46□□□□□ -0.09
Trim28-201ENSMUST00000005705 Tnfrsf8Q60846 498 aa14.46□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms