RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 CRIP3Q6Q6R5 217 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 WDR86Q86TI4 376 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 SCCPDHQ8NBX0 429 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 ZNF671Q8TAW3 534 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 Q8TCH9 128 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 NRGNQ92686 78 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 UQCC2Q9BRT2 126 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 PKIBQ9C010 78 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 FN3KRPQ9HA64 309 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 GCM1Q9NP62 436 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 AK6Q9Y3D8 172 aaKnown RBP10.42□□□□□ -0.74
LINC00339-213ENST00000642137 V9GY05 133 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 DYSFO75923 2080 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 ZNF701M0R085 212 aaPredicted RBP10.41□□□□□ -0.74
LINC00339-213ENST00000642137 CDIPTO14735 213 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 NCR1O76036 304 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 CDRT1O95170 752 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 IL1AP01583 271 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 COL8A2P25067 703 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 MPZP25189 248 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 PMELP40967 661 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 NCS1P62166 190 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 IL24Q13007 206 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 PDZK1IP1Q13113 114 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 RIN1Q13671 783 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 MPPED2Q15777 294 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 C1orf100Q5SVJ3 147 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 PRAMEF6Q5VXH4 476 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 RNF144BQ7Z419 303 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 ANGPTL5Q86XS5 388 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 MKXQ8IYA7 352 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 PNLDC1Q8NA58 520 aaKnown RBP10.41□□□□□ -0.74
LINC00339-213ENST00000642137 ZSCAN4Q8NAM6 433 aaPredicted RBP10.41□□□□□ -0.74
LINC00339-213ENST00000642137 OR10Z1Q8NGY1 313 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 AQP3Q92482 292 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 RDH5Q92781 318 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 NINJ1Q92982 152 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 DGCR14Q96DF8 476 aaKnown RBP10.41□□□□□ -0.74
LINC00339-213ENST00000642137 LURAP1Q96LR2 239 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 SPACA5Q96QH8 159 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 GPER1Q99527 375 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 GFI1Q99684 422 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 RBM38Q9H0Z9 239 aaKnown RBP10.41□□□□□ -0.74
LINC00339-213ENST00000642137 METTL17Q9H7H0 456 aaPredicted RBP10.41□□□□□ -0.74
LINC00339-213ENST00000642137 BATF3Q9NR55 127 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 DLL4Q9NR61 685 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 BEX4Q9NWD9 120 aaPredicted RBP10.41□□□□□ -0.74
LINC00339-213ENST00000642137 PPP1R3CQ9UQK1 317 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 CACNA1DQ01668 2161 aa10.41□□□□□ -0.74
LINC00339-213ENST00000642137 IGHV1-69-2A0A0G2JMI3 117 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 A6NHS1 94 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 J3QT63 122 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 SLC22A1O15245 554 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 NOL3O60936 208 aaKnown RBP10.4□□□□□ -0.74
LINC00339-213ENST00000642137 TMEM127O75204 238 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 TGFBR1P36897 503 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 RPS19P39019 145 aaKnown RBP10.4□□□□□ -0.74
LINC00339-213ENST00000642137 PTGFRP43088 359 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 SERPINB10P48595 397 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 ZP1P60852 638 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 HAGHLQ6PII5 290 aaPredicted RBP10.4□□□□□ -0.74
LINC00339-213ENST00000642137 ASCL4Q6XD76 172 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 USP43Q70EL4 1123 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 MOGAT3Q86VF5 341 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 CALHM1Q8IU99 346 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 CROCCP3Q8IVE0 287 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 SAXO1Q8IYX7 474 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 JAGN1Q8N5M9 183 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 PXT1Q8NFP0 134 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 OR11L1Q8NGX0 322 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 ISOC1Q96CN7 298 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 MBD6Q96DN6 1003 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 GSX2Q9BZM3 304 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 CNTD2Q9H8S5 307 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 BARX1Q9HBU1 254 aaPredicted RBP10.4□□□□□ -0.74
LINC00339-213ENST00000642137 MYOZ1Q9NP98 299 aaPredicted RBP10.4□□□□□ -0.74
LINC00339-213ENST00000642137 UFSP2Q9NUQ7 469 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 C1orf123Q9NWV4 160 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 RNF7Q9UBF6 113 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 RSL24D1Q9UHA3 163 aaKnown RBP10.4□□□□□ -0.74
LINC00339-213ENST00000642137 PLEKHA6Q9Y2H5 1048 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 POLDIP2Q9Y2S7 368 aa10.4□□□□□ -0.74
LINC00339-213ENST00000642137 UTP20O75691 2785 aaKnown RBP10.39□□□□□ -0.75
LINC00339-213ENST00000642137 IGHV3-64DA0A0J9YX35 117 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 CCDC160A6NGH7 325 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 A6NLC8 198 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 NOTOA8MTQ0 251 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 SLC17A2O00624 439 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 SYNGR1O43759 233 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 NOS1APO75052 506 aaPredicted RBP10.39□□□□□ -0.75
LINC00339-213ENST00000642137 NDUFS7O75251 213 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 CYB5AP00167 134 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 LHBP01229 141 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 CLEC2LP0C7M8 214 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 TMEM225BP0DP42 221 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 DAOP14920 347 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 CFPP27918 469 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 PTH2RP49190 550 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 MXD1Q05195 221 aa10.39□□□□□ -0.75
LINC00339-213ENST00000642137 HFEQ30201 348 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms