RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 OR3A2P47893 321 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 INPP1P49441 399 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 P2RX1P51575 399 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 NANOS3P60323 173 aaKnown RBP4.16□□□□□ -1.74
LINC00550-201ENST00000629293 RAC3P60763 192 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 ERVK-25P63136 954 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 KLF9Q13886 244 aaPredicted RBP4.16□□□□□ -1.74
LINC00550-201ENST00000629293 RNF151Q2KHN1 245 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 LAMTOR1Q6IAA8 161 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 C3orf33Q6P1S2 294 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 GPAT4Q86UL3 456 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 ZCCHC24Q8N2G6 241 aaKnown RBP4.16□□□□□ -1.74
LINC00550-201ENST00000629293 SMIM4Q8WVI0 70 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 SLC25A38Q96DW6 304 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 MRPL48Q96GC5 212 aaKnown RBP4.16□□□□□ -1.74
LINC00550-201ENST00000629293 MOGAT1Q96PD6 335 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 NUDT16L1Q9BRJ7 211 aaKnown RBP4.16□□□□□ -1.74
LINC00550-201ENST00000629293 HDHD2Q9H0R4 259 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 ABCG5Q9H222 651 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 RABL2AQ9UBK7 228 aaPredicted RBP4.16□□□□□ -1.74
LINC00550-201ENST00000629293 GNG8Q9UK08 70 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 RABL2BQ9UNT1 228 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 KLHDC2Q9Y2U9 406 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 IGLV3-32A0A0A0MS00 114 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 TRBV2A0A0J9YWF9 115 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 A6NIN4 97 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 FAM90A7PA6NKC0 464 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 AQP7P3A6NL99 342 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 FAM90A22PA8MWA6 464 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 FAM90A12PA8MX19 464 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 FAM90A23PA8MXZ1 464 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 UPK3AO75631 287 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 IGHV4-31P0DP07 118 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 PAX1P15863 534 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 PTAFRP25105 342 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 LCN1P31025 176 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 RPL4P36578 427 aaKnown RBP4.15□□□□□ -1.74
LINC00550-201ENST00000629293 RAG2P55895 527 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 RAB25P57735 213 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 CLRN1P58418 232 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 DGCR2P98153 550 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 HSD17B12Q53GQ0 312 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 UBE2NLQ5JXB2 153 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 TIMM23BQ5SRD1 257 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 UTS2BQ765I0 119 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 SLC16A9Q7RTY1 509 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 DTX2Q86UW9 622 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 MISPQ8IVT2 679 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 TIGD4Q8IY51 512 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF433Q8N7K0 673 aaPredicted RBP4.15□□□□□ -1.74
LINC00550-201ENST00000629293 LGALS14Q8TCE9 139 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 KIRREL1Q96J84 757 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 ARL5BQ96KC2 179 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 Q96M85 177 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 DERL3Q96Q80 235 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 DHRS9Q9BPW9 319 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 PDCD1LG2Q9BQ51 273 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 C7orf50Q9BRJ6 194 aaKnown RBP4.15□□□□□ -1.74
LINC00550-201ENST00000629293 ALG12Q9BV10 488 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 GON7Q9BXV9 100 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 FKRPQ9H9S5 495 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 PLEKHA2Q9HB19 425 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 SERINC1Q9NRX5 453 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 NUBP2Q9Y5Y2 271 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 RAI1Q7Z5J4 1906 aaPredicted RBP4.15□□□□□ -1.74
LINC00550-201ENST00000629293 IGHV4-61A0A0C4DH41 118 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 TRBV5-5A0A0J9YX44 114 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF879B4DU55 563 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 AIPO00170 330 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF264O43296 627 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 ZFPL1O95159 310 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 CLEC3BP05452 202 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 SLC25A16P16260 332 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 CFPP27918 469 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 PSMB10P40306 273 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 AQP2P41181 271 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 MNDAP41218 407 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 SRP9P49458 86 aaKnown RBP4.15□□□□□ -1.74
LINC00550-201ENST00000629293 PITPNAQ00169 270 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 MAB21L1Q13394 359 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 DYRK1AQ13627 763 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 MESTQ5EB52 335 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 FBXW9Q5XUX1 488 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 LEG1Q6P5S2 330 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 GPR119Q8TDV5 335 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 PIMREGQ9BSJ6 248 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 BPESC1Q9GZL8 116 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 LAT2Q9GZY6 243 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 NOX4Q9NPH5 578 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 SLCO1C1Q9NYB5 712 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 EMC3Q9P0I2 261 aa4.15□□□□□ -1.74
LINC00550-201ENST00000629293 SLC25A10Q9UBX3 287 aaPredicted RBP4.15□□□□□ -1.74
LINC00550-201ENST00000629293 MRM2Q9UI43 246 aaKnown RBP4.15□□□□□ -1.74
LINC00550-201ENST00000629293 DYSFO75923 2080 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 A0A1W2PQD3 144 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 IFITM5A6NNB3 132 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 ZNF780AO75290 641 aaPredicted RBP4.15□□□□□ -1.75
LINC00550-201ENST00000629293 TCRBP04435 133 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 CD3GP09693 182 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 SRMP19623 302 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms