RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 SERPINA12Q8IW75 414 aa12.55□□□□□ -0.4
UBXN1-218ENST00000616865 SPERTQ8NA61 448 aa12.55□□□□□ -0.4
UBXN1-218ENST00000616865 OR5D14Q8NGL3 314 aa12.55□□□□□ -0.4
UBXN1-218ENST00000616865 ZFAND2BQ8WV99 257 aa12.55□□□□□ -0.4
UBXN1-218ENST00000616865 GTF3AQ92664 365 aaKnown RBP12.55□□□□□ -0.4
UBXN1-218ENST00000616865 TMEM106AQ96A25 262 aa12.55□□□□□ -0.4
UBXN1-218ENST00000616865 ELMOD3Q96FG2 381 aa12.55□□□□□ -0.4
UBXN1-218ENST00000616865 OR14A2Q96R54 314 aa12.55□□□□□ -0.4
UBXN1-218ENST00000616865 MICU1Q9BPX6 476 aa12.55□□□□□ -0.4
UBXN1-218ENST00000616865 EGLN1Q9GZT9 426 aa12.55□□□□□ -0.4
UBXN1-218ENST00000616865 OCEL1Q9H607 264 aa12.55□□□□□ -0.4
UBXN1-218ENST00000616865 METTL17Q9H7H0 456 aaPredicted RBP12.55□□□□□ -0.4
UBXN1-218ENST00000616865 EXOSC4Q9NPD3 245 aaKnown RBP12.55□□□□□ -0.4
UBXN1-218ENST00000616865 GPR173Q9NS66 373 aa12.55□□□□□ -0.4
UBXN1-218ENST00000616865 DECR2Q9NUI1 292 aa12.55□□□□□ -0.4
UBXN1-218ENST00000616865 SSR3Q9UNL2 185 aa12.55□□□□□ -0.4
UBXN1-218ENST00000616865 SLC7A11Q9UPY5 501 aa12.55□□□□□ -0.4
UBXN1-218ENST00000616865 TRBV5-5A0A0J9YX44 114 aa12.54□□□□□ -0.4
UBXN1-218ENST00000616865 ANKRD61A6NGH8 418 aa12.54□□□□□ -0.4
UBXN1-218ENST00000616865 ZSCAN5BA6NJL1 495 aa12.54□□□□□ -0.4
UBXN1-218ENST00000616865 WIPF1O43516 503 aa12.54□□□□□ -0.4
UBXN1-218ENST00000616865 MAGEB1P43366 347 aa12.54□□□□□ -0.4
UBXN1-218ENST00000616865 PPP3R1P63098 170 aa12.54□□□□□ -0.4
UBXN1-218ENST00000616865 TNFAIP6P98066 277 aaPredicted RBP12.54□□□□□ -0.4
UBXN1-218ENST00000616865 CNN3Q15417 329 aaKnown RBP12.54□□□□□ -0.4
UBXN1-218ENST00000616865 Q6ZR03 302 aa12.54□□□□□ -0.4
UBXN1-218ENST00000616865 GPR141Q7Z602 305 aa12.54□□□□□ -0.4
UBXN1-218ENST00000616865 OR10AD1Q8NGE0 317 aa12.54□□□□□ -0.4
UBXN1-218ENST00000616865 ADAT3Q96EY9 351 aaPredicted RBP12.54□□□□□ -0.4
UBXN1-218ENST00000616865 TECTBQ96PL2 329 aa12.54□□□□□ -0.4
UBXN1-218ENST00000616865 RTL8AQ9BWD3 113 aa12.54□□□□□ -0.4
UBXN1-218ENST00000616865 SLITRK2Q9H156 845 aa12.54□□□□□ -0.4
UBXN1-218ENST00000616865 ZCCHC4Q9H5U6 513 aa12.54□□□□□ -0.4
UBXN1-218ENST00000616865 C14orf119Q9NWQ9 140 aa12.54□□□□□ -0.4
UBXN1-218ENST00000616865 A0A1W2PPK0 400 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 H0YL77 283 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 MAGEB3O15480 346 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 ARL6IP5O75915 188 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 IGHV1-46P01743 117 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 GPR6P46095 362 aaPredicted RBP12.53□□□□□ -0.4
UBXN1-218ENST00000616865 SRP9P49458 86 aaKnown RBP12.53□□□□□ -0.4
UBXN1-218ENST00000616865 RPS11P62280 158 aaKnown RBP eCLIP12.53□□□□□ -0.4
UBXN1-218ENST00000616865 FABP5Q01469 135 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 TIMM50Q3ZCQ8 353 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 CEP78Q5JTW2 689 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 OR13C9Q8NGT0 318 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 CLDND2Q8NHS1 167 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 DVL3Q92997 716 aaPredicted RBP12.53□□□□□ -0.4
UBXN1-218ENST00000616865 TMEM186Q96B77 213 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 RNF170Q96K19 258 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 CHST5Q9GZS9 411 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 NARFLQ9H6Q4 476 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 TCF7L1Q9HCS4 588 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 NOX4Q9NPH5 578 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 HIF1ANQ9NWT6 349 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 STUB1Q9UNE7 303 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 GSTK1Q9Y2Q3 226 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 DYSFO75923 2080 aa12.53□□□□□ -0.4
UBXN1-218ENST00000616865 LOC100506127A0A0U1RQW1 187 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 FAM230AA0A1W2PPH8 454 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 FAM157AC9JC47 383 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 F5H5P2 479 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 GABRPO00591 440 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 MLNRO43193 412 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 SPRY1O43609 319 aaPredicted RBP12.52□□□□□ -0.41
UBXN1-218ENST00000616865 HPXP02790 462 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 HCKP08631 526 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 ATF1P18846 271 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 RAB3AP20336 220 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 PRKACBP22694 351 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 TGFBR2P37173 567 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 RPL5P46777 297 aaKnown RBP12.52□□□□□ -0.41
UBXN1-218ENST00000616865 CCL8P80075 99 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 SCGB2A2Q13296 93 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 CEACAM21Q3KPI0 293 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 HSD17B12Q53GQ0 312 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 FAM209AQ5JX71 171 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 UTS2BQ765I0 119 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 PARP16Q8N5Y8 322 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 TRMT10AQ8TBZ6 339 aaKnown RBP12.52□□□□□ -0.41
UBXN1-218ENST00000616865 NPRL2Q8WTW4 380 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 PHYHIPQ92561 330 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 DERL3Q96Q80 235 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 TAS2R4Q9NYW5 299 aa12.52□□□□□ -0.41
UBXN1-218ENST00000616865 SF3B6Q9Y3B4 125 aaKnown RBP12.52□□□□□ -0.41
UBXN1-218ENST00000616865 TENM1Q9UKZ4 2725 aa12.51□□□□□ -0.41
UBXN1-218ENST00000616865 TRBV5-7A0A0A0MS05 114 aa12.51□□□□□ -0.41
UBXN1-218ENST00000616865 TRDV1A0A1B0GX56 115 aa12.51□□□□□ -0.41
UBXN1-218ENST00000616865 OR5B21A6NL26 309 aa12.51□□□□□ -0.41
UBXN1-218ENST00000616865 SULT1B1O43704 296 aa12.51□□□□□ -0.41
UBXN1-218ENST00000616865 TFAP2AP05549 437 aa12.51□□□□□ -0.41
UBXN1-218ENST00000616865 GRPP07492 148 aa12.51□□□□□ -0.41
UBXN1-218ENST00000616865 MSMBP08118 114 aa12.51□□□□□ -0.41
UBXN1-218ENST00000616865 TNFRSF1AP19438 455 aa12.51□□□□□ -0.41
UBXN1-218ENST00000616865 GALP22466 123 aa12.51□□□□□ -0.41
UBXN1-218ENST00000616865 GADD45AP24522 165 aa12.51□□□□□ -0.41
UBXN1-218ENST00000616865 MYL9P24844 172 aa12.51□□□□□ -0.41
UBXN1-218ENST00000616865 ALDH3B2P48448 385 aa12.51□□□□□ -0.41
UBXN1-218ENST00000616865 COMPP49747 757 aaPredicted RBP12.51□□□□□ -0.41
UBXN1-218ENST00000616865 GNG3P63215 75 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms