RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 PLAC9Q5JTB6 97 aa16.64■□□□□ 0.25
MMP28-204ENST00000615136 GSG1LQ6UXU4 331 aa16.64■□□□□ 0.25
MMP28-204ENST00000615136 Q6ZSR3 168 aa16.64■□□□□ 0.25
MMP28-204ENST00000615136 NUFIP2Q7Z417 695 aaKnown RBP16.64■□□□□ 0.25
MMP28-204ENST00000615136 SCARB1Q8WTV0 552 aa16.64■□□□□ 0.25
MMP28-204ENST00000615136 CST11Q9H112 138 aa16.64■□□□□ 0.25
MMP28-204ENST00000615136 LDAHQ9H6V9 325 aa16.64■□□□□ 0.25
MMP28-204ENST00000615136 DLL3Q9NYJ7 618 aa16.64■□□□□ 0.25
MMP28-204ENST00000615136 TIMM10BQ9Y5J6 103 aa16.64■□□□□ 0.25
MMP28-204ENST00000615136 GVINP1Q7Z2Y8 2422 aa16.64■□□□□ 0.25
MMP28-204ENST00000615136 ZNF503-AS2A6NEH8 195 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 I3L521 148 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 DRAM2Q6UX65 266 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 C1QL2Q7Z5L3 287 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 CPEB3Q8NE35 698 aaKnown RBP16.63■□□□□ 0.25
MMP28-204ENST00000615136 RAB3CQ96E17 227 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 WDYHV1Q96HA8 205 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 MFFQ9GZY8 342 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 BCO1Q9HAY6 547 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 MED9Q9NWA0 146 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 NOP16Q9Y3C1 178 aaKnown RBP16.63■□□□□ 0.25
MMP28-204ENST00000615136 OR2AT4A6NND4 320 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 THBS4P35443 961 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 ALDH3B1P43353 468 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 FGL1Q08830 312 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 ECH1Q13011 328 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 PPP1R1AQ13522 171 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 GK2Q14410 553 aaPredicted RBP16.63■□□□□ 0.25
MMP28-204ENST00000615136 PNLIPRP3Q17RR3 467 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 OR6K3Q8NGY3 331 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 MITD1Q8WV92 249 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 LINC00470Q9BZP3 86 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 OR10A2Q9H208 303 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 BANF2Q9H503 90 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 ZDHHC11Q9H8X9 412 aa16.63■□□□□ 0.25
MMP28-204ENST00000615136 SOCS1O15524 211 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 ACTL6AO96019 429 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 LCATP04180 440 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 MPGP29372 298 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 AGTR1P30556 359 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 PABPC1L2AQ5JQF8 200 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 TMEM65Q6PI78 240 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 TMEM178AQ8NBL3 297 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 REEP6Q96HR9 211 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 ZNF230Q9UIE0 474 aaPredicted RBP16.62■□□□□ 0.25
MMP28-204ENST00000615136 CEP250Q9BV73 2442 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 TRGV5A0A0B4J1U4 118 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 C9orf170A2RU37 121 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 MFNGO00587 321 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 APOC1P02654 83 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 NMBP08949 121 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 TMEM50BP56557 158 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 KISS1Q15726 138 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 ACTBL2Q562R1 376 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 LIN54Q6MZP7 749 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 IGF2-ASQ6U949 168 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 OR56B1Q8NGI3 324 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 PIGTQ969N2 578 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 GPER1Q99527 375 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 CHST5Q9GZS9 411 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 FN3KRPQ9HA64 309 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 GHRLQ9UBU3 117 aa16.62■□□□□ 0.25
MMP28-204ENST00000615136 DOCK7Q96N67 2140 aa16.61■□□□□ 0.25
MMP28-204ENST00000615136 BOD1L1Q8NFC6 3051 aa16.61■□□□□ 0.25
MMP28-204ENST00000615136 TNRC6AQ8NDV7 1962 aaKnown RBP16.61■□□□□ 0.25
MMP28-204ENST00000615136 hCG_1807616A0A1W2PRN6 198 aa16.61■□□□□ 0.25
MMP28-204ENST00000615136 ZNF724A8MTY0 619 aa16.61■□□□□ 0.25
MMP28-204ENST00000615136 CLN3Q13286 438 aa16.61■□□□□ 0.25
MMP28-204ENST00000615136 DEFB109BQ30KR1 87 aa16.61■□□□□ 0.25
MMP28-204ENST00000615136 VAX1Q5SQQ9 334 aa16.61■□□□□ 0.25
MMP28-204ENST00000615136 ALKAL2Q6UX46 152 aa16.61■□□□□ 0.25
MMP28-204ENST00000615136 HOGA1Q86XE5 327 aa16.61■□□□□ 0.25
MMP28-204ENST00000615136 FAM89BQ8N5H3 189 aa16.61■□□□□ 0.25
MMP28-204ENST00000615136 PNLDC1Q8NA58 520 aaKnown RBP16.61■□□□□ 0.25
MMP28-204ENST00000615136 OR52H1Q8NGJ2 320 aa16.61■□□□□ 0.25
MMP28-204ENST00000615136 OR4K15Q8NH41 348 aa16.61■□□□□ 0.25
MMP28-204ENST00000615136 URM1Q9BTM9 101 aaKnown RBP16.61■□□□□ 0.25
MMP28-204ENST00000615136 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.61■□□□□ 0.25
MMP28-204ENST00000615136 PARPBPQ9NWS1 579 aa16.61■□□□□ 0.25
MMP28-204ENST00000615136 ARHGAP21Q5T5U3 1957 aa16.61■□□□□ 0.25
MMP28-204ENST00000615136 LOC100509620A0A075B734 347 aa16.6■□□□□ 0.25
MMP28-204ENST00000615136 OR5H14A6NHG9 310 aa16.6■□□□□ 0.25
MMP28-204ENST00000615136 CRTAPO75718 401 aaPredicted RBP16.6■□□□□ 0.25
MMP28-204ENST00000615136 HLA-HP01893 362 aa16.6■□□□□ 0.25
MMP28-204ENST00000615136 IFNA6P05013 189 aa16.6■□□□□ 0.25
MMP28-204ENST00000615136 SLC25A4P12235 298 aa16.6■□□□□ 0.25
MMP28-204ENST00000615136 CEACAM1P13688 526 aa16.6■□□□□ 0.25
MMP28-204ENST00000615136 ZNF660Q6AZW8 331 aaPredicted RBP16.6■□□□□ 0.25
MMP28-204ENST00000615136 SLC51BQ86UW2 128 aa16.6■□□□□ 0.25
MMP28-204ENST00000615136 CCDC54Q8NEL0 328 aa16.6■□□□□ 0.25
MMP28-204ENST00000615136 PP6455Q8WZ26 134 aa16.6■□□□□ 0.25
MMP28-204ENST00000615136 RBPMSQ93062 196 aaKnown RBP16.6■□□□□ 0.25
MMP28-204ENST00000615136 FBXW5Q969U6 566 aa16.6■□□□□ 0.25
MMP28-204ENST00000615136 C12orf49Q9H741 205 aa16.6■□□□□ 0.25
MMP28-204ENST00000615136 GPR173Q9NS66 373 aa16.6■□□□□ 0.25
MMP28-204ENST00000615136 PRSS50Q9UI38 385 aa16.6■□□□□ 0.25
MMP28-204ENST00000615136 CEACAM18A8MTB9 384 aa16.6■□□□□ 0.25
MMP28-204ENST00000615136 FOXI3A8MTJ6 420 aaPredicted RBP16.6■□□□□ 0.25
MMP28-204ENST00000615136 RPL36A-HNRNPH2H7BZ11 118 aa16.6■□□□□ 0.25
MMP28-204ENST00000615136 RAD51DO75771 328 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms