RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 IFITM10A6NMD0 228 aa19.33■□□□□ 0.69
POLR2J3-220ENST00000613744 STMND1H3BQB6 276 aa19.33■□□□□ 0.69
POLR2J3-220ENST00000613744 RPL36A-HNRNPH2H7BZ11 118 aa19.33■□□□□ 0.69
POLR2J3-220ENST00000613744 F13BP05160 661 aa19.33■□□□□ 0.69
POLR2J3-220ENST00000613744 RNF224P0DH78 156 aa19.33■□□□□ 0.69
POLR2J3-220ENST00000613744 TCN2P20062 427 aa19.33■□□□□ 0.69
POLR2J3-220ENST00000613744 HSD11B1P28845 292 aa19.33■□□□□ 0.69
POLR2J3-220ENST00000613744 THBS4P35443 961 aa19.33■□□□□ 0.69
POLR2J3-220ENST00000613744 RPS27P42677 84 aaKnown RBP19.33■□□□□ 0.69
POLR2J3-220ENST00000613744 SLC26A5P58743 744 aa19.33■□□□□ 0.69
POLR2J3-220ENST00000613744 RAP1AP62834 184 aa19.33■□□□□ 0.69
POLR2J3-220ENST00000613744 OR4D6Q8NGJ1 314 aa19.33■□□□□ 0.69
POLR2J3-220ENST00000613744 OR51A2Q8NGJ7 313 aa19.33■□□□□ 0.69
POLR2J3-220ENST00000613744 OR51F2Q8NH61 342 aa19.33■□□□□ 0.69
POLR2J3-220ENST00000613744 KCNJ16Q9NPI9 418 aa19.33■□□□□ 0.69
POLR2J3-220ENST00000613744 UBQLN4Q9NRR5 601 aa19.33■□□□□ 0.69
POLR2J3-220ENST00000613744 LUZP4Q9P127 313 aa19.33■□□□□ 0.69
POLR2J3-220ENST00000613744 STRAPQ9Y3F4 350 aaKnown RBP19.33■□□□□ 0.69
POLR2J3-220ENST00000613744 H7C1C5 153 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 CXCR1P25024 350 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 LCN6P62502 163 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 QRFPP83859 136 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 MFGE8Q08431 387 aaPredicted RBP19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 RTP5Q14D33 572 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 DGAT2L6Q6ZPD8 337 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 BHLHE23Q8NDY6 225 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 LFNGQ8NES3 379 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 CT55Q8WUE5 264 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 C8orf44Q96CB5 159 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 OR10C1Q96KK4 312 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 CNTNAP3Q9BZ76 1288 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 Q9N2J8 555 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 R4GMQ9 66 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 OR2C1O95371 312 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 PMP2P02689 132 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 CHRM2P08172 466 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 CD63P08962 238 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 GSTP1P09211 210 aaKnown RBP19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 DANCRP0C864 163 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 RD3LP0DJH9 198 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 RPL12P30050 165 aaKnown RBP19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 HSD17B7P56937 341 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 SPCS3P61009 180 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 RPS18P62269 152 aaKnown RBP19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 SPOCK1Q08629 439 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 MIDNQ504T8 468 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 TSLPQ969D9 159 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 GALNT14Q96FL9 552 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 VSTM2LQ96N03 204 aa19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 NKX3-1Q99801 234 aaPredicted RBP19.32■□□□□ 0.68
POLR2J3-220ENST00000613744 A0A1W2PPE2 198 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 K7EPK0 472 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 SRSF10O75494 262 aaKnown RBP19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 YIF1AO95070 293 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 ARG1P05089 322 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 CLINT1Q14677 625 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 SLC9A3R2Q15599 337 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 MRPL14Q6P1L8 145 aaKnown RBP19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 MED25Q71SY5 747 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 FAM71E2Q8N5Q1 922 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 OR4N2Q8NGD1 307 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 C2orf88Q9BSF0 95 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 PLEKHA2Q9HB19 425 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 B9D1Q9UPM9 204 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 ZFHX4Q86UP3 3567 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 BLACEA4D250 179 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 C9J4A7 227 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 LY86O95711 162 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 DAOP14920 347 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 LMO1P25800 156 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 CHATP28329 748 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 RPS23P62266 143 aaKnown RBP19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 SUPT4H1P63272 117 aaKnown RBP19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 ANKRD55Q3KP44 614 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 SLC22A6Q4U2R8 563 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 LRRC18Q8N456 261 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 NKD1Q969G9 470 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 DGAT2Q96PD7 388 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 VN1R1Q9GZP7 353 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 FBXL17Q9UF56 701 aa19.31■□□□□ 0.68
POLR2J3-220ENST00000613744 LOC101059948A0A1B0GTJ6 334 aa19.3■□□□□ 0.68
POLR2J3-220ENST00000613744 TSTD3H0UI37 97 aa19.3■□□□□ 0.68
POLR2J3-220ENST00000613744 XKRYO14609 159 aa19.3■□□□□ 0.68
POLR2J3-220ENST00000613744 IL22RA1Q8N6P7 574 aa19.3■□□□□ 0.68
POLR2J3-220ENST00000613744 EIF5A2Q9GZV4 153 aaKnown RBP19.3■□□□□ 0.68
POLR2J3-220ENST00000613744 PPP1R14DQ9NXH3 145 aa19.3■□□□□ 0.68
POLR2J3-220ENST00000613744 CLDN16Q9Y5I7 305 aa19.3■□□□□ 0.68
POLR2J3-220ENST00000613744 A0A087WWC5 75 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 TERTO14746 1132 aaKnown RBP19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 DXOO77932 396 aaKnown RBP19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 OR6A2O95222 327 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 ONECUT2O95948 504 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 ZNF708P17019 499 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 FCGR2CP31995 323 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 S100A10P60903 97 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 UNC119Q13432 240 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 SLC22A24Q8N4F4 322 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 ZNF610Q8N9Z0 462 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 OR13D1Q8NGV5 346 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms