RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 DHFRP00374 187 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 TCRBP04435 133 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 SOD3P08294 240 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 CDK2P24941 298 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 GLRXP35754 106 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 RPS23P62266 143 aaKnown RBP7.59□□□□□ -1.19
SMAD4-217ENST00000611848 NKX6-1P78426 367 aaPredicted RBP7.59□□□□□ -1.19
SMAD4-217ENST00000611848 SNTB2Q13425 540 aaKnown RBP7.59□□□□□ -1.19
SMAD4-217ENST00000611848 ODF4Q2M2E3 257 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 DEFB113Q30KQ7 82 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 ZNF774Q6NX45 483 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 UNQ6126/PRO20091Q6UXV3 157 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 NOXA1Q86UR1 476 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 C1orf174Q8IYL3 243 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 OR52I2Q8NH67 350 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 AKR7LQ8NHP1 331 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 FCAMRQ8WWV6 532 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 POM121L2Q96KW2 1035 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 DMRTB1Q96MA1 342 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 FYTTD1Q96QD9 318 aaKnown RBP7.59□□□□□ -1.19
SMAD4-217ENST00000611848 FOXC2Q99958 501 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 CACNG6Q9BXT2 260 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 GHITMQ9H3K2 345 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 AUNIPQ9H7T9 357 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 PLEK2Q9NYT0 353 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 ASH2LQ9UBL3 628 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 ATPIF1Q9UII2 106 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 FBXO9Q9UK97 447 aaPredicted RBP7.59□□□□□ -1.19
SMAD4-217ENST00000611848 ITGB1BP2Q9UKP3 347 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 HHLA2Q9UM44 414 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 TMEM269A0A1B0GVZ9 245 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 ANKRD20A5PA0PJZ0 165 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 NAP1L6A6NFF2 107 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 B9A039 149 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 XRCC3O43542 346 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 SYNGR3O43761 229 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 DOK2O60496 412 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 SMPD2O60906 423 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 CD8AP01732 235 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 CD2P06729 351 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 PAX1P15863 534 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 GIFP27352 417 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 RAD52P43351 418 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 RAB25P57735 213 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 TAS2R20P59543 309 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 AP3S2P59780 193 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 HIST1H3AP68431 136 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 CD83Q01151 205 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 RAB35Q15286 201 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 RAB11BQ15907 218 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 CCDC92Q53HC0 331 aaPredicted RBP7.58□□□□□ -1.2
SMAD4-217ENST00000611848 ELFN2Q5R3F8 820 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 TMEM69Q5SWH9 247 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 HIST2H3PS2Q5TEC6 136 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 TMEM244Q5VVB8 128 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 HIST2H3AQ71DI3 136 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 BTN2A1Q7KYR7 527 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 RHOUQ7L0Q8 258 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 SERPINA12Q8IW75 414 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 LRRC75A-AS1Q8N1F1 130 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 OR2AJ1Q8NGZ0 328 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 SLC25A28Q96A46 364 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 BCL2L14Q9BZR8 327 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 NIPAL2Q9H841 368 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 HRASLSQ9HDD0 168 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 DDX28Q9NUL7 540 aaKnown RBP7.58□□□□□ -1.2
SMAD4-217ENST00000611848 NUDT15Q9NV35 164 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 FAM206AQ9NX38 181 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 EIF3KQ9UBQ5 218 aaKnown RBP7.58□□□□□ -1.2
SMAD4-217ENST00000611848 CKLFQ9UBR5 152 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 LHFPL6Q9Y693 200 aa7.58□□□□□ -1.2
SMAD4-217ENST00000611848 LOC100509620A0A075B734 347 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 LOC100289279A0A1B0GTE1 492 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 LOC107986453A0A1B0GWG9 222 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 LOC390937A0A1W2PQ73 354 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 C5orf49A4QMS7 147 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 MEGF11A6BM72 1044 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 OVOL3O00110 214 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 RER1O15258 196 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 C1QBP02746 253 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 MT-ND4P03905 459 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 H2BFMP0C1H6 154 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 OR4A8P0C604 315 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 GSTT2BP0CG30 244 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 UBCP0CG48 685 aaKnown RBP7.57□□□□□ -1.2
SMAD4-217ENST00000611848 CCL2P13500 99 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 CCNOP22674 350 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 THBS4P35443 961 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 SERPINF1P36955 418 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 HTR5AP47898 357 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 UCP2P55851 309 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 TAGLNQ01995 201 aaKnown RBP7.57□□□□□ -1.2
SMAD4-217ENST00000611848 ECH1Q13011 328 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 PLA2G7Q13093 441 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 EFNB3Q15768 340 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 ADIPOQQ15848 244 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 C2orf76Q3KRA6 126 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 RNASE12Q5GAN4 147 aaKnown RBP7.57□□□□□ -1.2
SMAD4-217ENST00000611848 BCL2L15Q5TBC7 163 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 OLFML2AQ68BL7 652 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms