RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 GSK3AP49840 483 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 FHL5Q5TD97 284 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 RHBDD2Q6NTF9 364 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 ZDHHC23Q8IYP9 409 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 C1orf87Q8N0U7 546 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 ZNF561Q8N587 486 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 OR1J1Q8NGS3 322 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 OR2V1Q8NHB1 315 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 KISS1RQ969F8 398 aaPredicted RBP11.04□□□□□ -0.64
CDH1-212ENST00000611625 RTL8AQ9BWD3 113 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 ZFP64Q9NPA5 681 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 SOCS1O15524 211 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 MMP16P51512 607 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 ZNF239Q16600 458 aaKnown RBP11.04□□□□□ -0.64
CDH1-212ENST00000611625 MIDNQ504T8 468 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 GUSBP11Q6P575 273 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 MRPL41Q8IXM3 137 aaKnown RBP11.04□□□□□ -0.64
CDH1-212ENST00000611625 C20orf196Q8IYI0 205 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 COMMD1Q8N668 190 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 SLC26A10Q8NG04 563 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 OR6X1Q8NH79 312 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 OR2AE1Q8NHA4 323 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 RNF133Q8WVZ7 376 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 LIN37Q96GY3 246 aaPredicted RBP11.04□□□□□ -0.64
CDH1-212ENST00000611625 FER1L6-AS2Q96M78 137 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 LANCL2Q9NS86 450 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 DOCK4Q8N1I0 1966 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 TXNDC12O95881 172 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 HTD2P86397 168 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 GUK1Q16774 197 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 BRICD5Q6PL45 260 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 C9orf40Q8IXQ3 194 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 RAB39BQ96DA2 213 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 FAAP24Q9BTP7 215 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 MS4A7Q9GZW8 240 aaPredicted RBP11.04□□□□□ -0.64
CDH1-212ENST00000611625 MTCH2Q9Y6C9 303 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 VSIG8P0DPA2 414 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 PTGER4P35408 488 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 INSM1Q01101 510 aaPredicted RBP11.04□□□□□ -0.64
CDH1-212ENST00000611625 DCAF12L2Q5VW00 463 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 JMJD6Q6NYC1 403 aaPredicted RBP11.04□□□□□ -0.64
CDH1-212ENST00000611625 CLEC18BQ6UXF7 455 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 ZNF573Q86YE8 665 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 RXFP4Q8TDU9 374 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 EXTL1Q92935 676 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 WDR90Q96KV7 1748 aa11.04□□□□□ -0.64
CDH1-212ENST00000611625 OR5H15A6NDH6 313 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 GPR31O00270 319 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 IFI6P09912 130 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 DHODHQ02127 395 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 FZD5Q13467 585 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 SPANXN5Q5MJ07 72 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 GGNBP1Q5YKI7 109 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 C19orf12Q9NSK7 152 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 FBXL17Q9UF56 701 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 GAB2Q9UQC2 676 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 POLDIP2Q9Y2S7 368 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 TMEM218A2RU14 115 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 TMEM229AB2RXF0 380 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 UPK3AO75631 287 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 TBX6O95947 436 aaPredicted RBP11.03□□□□□ -0.64
CDH1-212ENST00000611625 CFDP00746 253 aaPredicted RBP11.03□□□□□ -0.64
CDH1-212ENST00000611625 NMBP08949 121 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 HLA-DOBP13765 273 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 KITLGP21583 273 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 RPL7L1Q6DKI1 246 aaKnown RBP11.03□□□□□ -0.64
CDH1-212ENST00000611625 THNSL2Q86YJ6 484 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 MITD1Q8WV92 249 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 SCN2AQ99250 2005 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 RAB27BO00194 218 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 UNQ9370/PRO34162Q6UXP9 181 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 STPG2Q8N412 459 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 CTHRC1Q96CG8 243 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 AMELYQ99218 206 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 RIMS4Q9H426 269 aaPredicted RBP11.03□□□□□ -0.64
CDH1-212ENST00000611625 PPP1R3CQ9UQK1 317 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 A0A1W2PPC1 479 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 C4orf47A7E2U8 309 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 CST7O76096 145 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 HLA-HP01893 362 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 IGHV4-34P06331 123 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 ADRA2AP08913 450 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 ARR3P36575 388 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 PDCD1Q15116 288 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 TUSC1Q2TAM9 212 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 PIK3IP1Q96FE7 263 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 PRR13Q9NZ81 148 aa11.03□□□□□ -0.64
CDH1-212ENST00000611625 ZIC2O95409 532 aaPredicted RBP11.02□□□□□ -0.64
CDH1-212ENST00000611625 PPIAP62937 165 aaKnown RBP11.02□□□□□ -0.64
CDH1-212ENST00000611625 OR4A16Q8NH70 328 aa11.02□□□□□ -0.64
CDH1-212ENST00000611625 TECTBQ96PL2 329 aa11.02□□□□□ -0.64
CDH1-212ENST00000611625 ZNF426Q9BUY5 554 aa11.02□□□□□ -0.64
CDH1-212ENST00000611625 NMES1Q9C002 83 aa11.02□□□□□ -0.64
CDH1-212ENST00000611625 ARV1Q9H2C2 271 aa11.02□□□□□ -0.64
CDH1-212ENST00000611625 HEYLQ9NQ87 328 aaPredicted RBP11.02□□□□□ -0.64
CDH1-212ENST00000611625 SERTAD4Q9NUC0 356 aa11.02□□□□□ -0.64
CDH1-212ENST00000611625 TMED3Q9Y3Q3 217 aa11.02□□□□□ -0.64
CDH1-212ENST00000611625 A0A0B4J293 547 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 SIRPB1O00241 398 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 DVL1P1P54792 670 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms