RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 CD300LFQ8TDQ1 290 aa14.09□□□□□ -0.15
RTN1-209ENST00000611068 OR5B2Q96R09 309 aa14.09□□□□□ -0.15
RTN1-209ENST00000611068 ADAM19Q9H013 955 aa14.09□□□□□ -0.15
RTN1-209ENST00000611068 OR51B6Q9H340 312 aa14.09□□□□□ -0.15
RTN1-209ENST00000611068 CMC2Q9NRP2 79 aa14.09□□□□□ -0.15
RTN1-209ENST00000611068 WIF1Q9Y5W5 379 aa14.09□□□□□ -0.15
RTN1-209ENST00000611068 URB1O60287 2271 aaKnown RBP14.09□□□□□ -0.15
RTN1-209ENST00000611068 COL5A1P20908 1838 aaPredicted RBP14.09□□□□□ -0.15
RTN1-209ENST00000611068 ZNF727A8MUV8 499 aa14.09□□□□□ -0.15
RTN1-209ENST00000611068 B4E171 279 aa14.09□□□□□ -0.15
RTN1-209ENST00000611068 OGG1O15527 345 aa14.09□□□□□ -0.15
RTN1-209ENST00000611068 GZMBP10144 247 aa14.09□□□□□ -0.15
RTN1-209ENST00000611068 EFNB2P52799 333 aa14.09□□□□□ -0.15
RTN1-209ENST00000611068 SLC10A1Q14973 349 aa14.09□□□□□ -0.15
RTN1-209ENST00000611068 ZNF529Q6P280 563 aa14.09□□□□□ -0.15
RTN1-209ENST00000611068 OR1J1Q8NGS3 322 aa14.09□□□□□ -0.15
RTN1-209ENST00000611068 RNF126Q9BV68 326 aa14.09□□□□□ -0.15
RTN1-209ENST00000611068 NXT1Q9UKK6 140 aaKnown RBP14.09□□□□□ -0.15
RTN1-209ENST00000611068 UMAD1C9J7I0 102 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 H0YIZ8 118 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 NAA10P41227 235 aaPredicted RBP14.08□□□□□ -0.16
RTN1-209ENST00000611068 CTXN1P60606 82 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 HMGN3Q15651 99 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 ARHGAP11AQ6P4F7 1023 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 CLEC1AQ8NC01 280 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 IMMP1LQ96LU5 166 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 HIST1H2BLQ99880 126 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 CBLN4Q9NTU7 201 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 KMT2EQ8IZD2 1858 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 COL27A1Q8IZC6 1860 aaPredicted RBP14.08□□□□□ -0.16
RTN1-209ENST00000611068 A0A1W2PQD3 144 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 TNFSF15O95150 251 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 LINC00614P0C842 121 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 FGF7P21781 194 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 SLC6A8P48029 635 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 NKX6-1P78426 367 aaPredicted RBP14.08□□□□□ -0.16
RTN1-209ENST00000611068 RPL18Q07020 188 aaKnown RBP14.08□□□□□ -0.16
RTN1-209ENST00000611068 Q0VFX4 171 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 PNLIPRP3Q17RR3 467 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 AKR1C8PQ5T2L2 129 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 KCTD9Q7L273 389 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 OR6K6Q8NGW6 343 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 SVIPQ8NHG7 77 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 KCNK15Q9H427 330 aa14.08□□□□□ -0.16
RTN1-209ENST00000611068 DCHS1Q96JQ0 3298 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 C13orf42A0A1B0GVH6 325 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 SMCO3A2RU48 225 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 CA11O75493 328 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 PTBP3O95758 552 aaKnown RBP14.07□□□□□ -0.16
RTN1-209ENST00000611068 GPANK1O95872 356 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 EDNRAP25101 427 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 PSMB6P28072 239 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 TCF15Q12870 199 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 UBE2V2Q15819 145 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 ALG10Q5BKT4 473 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 HIST2H3PS2Q5TEC6 136 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 GGNBP1Q5YKI7 109 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 Q6ZRG5 221 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 DND1Q8IYX4 353 aaKnown RBP14.07□□□□□ -0.16
RTN1-209ENST00000611068 GABRG1Q8N1C3 465 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 SRA1Q9HD15 236 aaKnown RBP14.07□□□□□ -0.16
RTN1-209ENST00000611068 INPP5EQ9NRR6 644 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 TAS2R8Q9NYW2 309 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 URGCP-MRPS24S4R325 110 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 TRGC2P03986 189 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 ADRA2CP18825 462 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 CDKN2AP42771 156 aaKnown RBP14.07□□□□□ -0.16
RTN1-209ENST00000611068 SIRPAP78324 504 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 C17orf67Q0P5P2 114 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 FOXF1Q12946 379 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 RHEBQ15382 184 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 OR2T2Q6IF00 324 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 MDGA2Q7Z553 956 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 TMEM156Q8N614 296 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 CASTOR1Q8WTX7 329 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 MUCL1Q96DR8 90 aa14.07□□□□□ -0.16
RTN1-209ENST00000611068 SPACA9Q96E40 222 aaPredicted RBP14.07□□□□□ -0.16
RTN1-209ENST00000611068 FARSAQ9Y285 508 aaKnown RBP14.07□□□□□ -0.16
RTN1-209ENST00000611068 TRAV18A0A075B6X5 111 aa14.06□□□□□ -0.16
RTN1-209ENST00000611068 LOC102723996A0A087X1L8 192 aa14.06□□□□□ -0.16
RTN1-209ENST00000611068 CSN2P05814 226 aa14.06□□□□□ -0.16
RTN1-209ENST00000611068 PTGDSP41222 190 aa14.06□□□□□ -0.16
RTN1-209ENST00000611068 PPP1R1AQ13522 171 aa14.06□□□□□ -0.16
RTN1-209ENST00000611068 LEG1Q6P5S2 330 aa14.06□□□□□ -0.16
RTN1-209ENST00000611068 UNQ9370/PRO34162Q6UXP9 181 aa14.06□□□□□ -0.16
RTN1-209ENST00000611068 PPP1R32Q7Z5V6 425 aa14.06□□□□□ -0.16
RTN1-209ENST00000611068 GNRHR2Q96P88 292 aa14.06□□□□□ -0.16
RTN1-209ENST00000611068 ZNF700Q9H0M5 742 aa14.06□□□□□ -0.16
RTN1-209ENST00000611068 CACNA1CQ13936 2221 aa14.06□□□□□ -0.16
RTN1-209ENST00000611068 CRYABP02511 175 aaKnown RBP14.06□□□□□ -0.16
RTN1-209ENST00000611068 AMY2AP04746 511 aa14.06□□□□□ -0.16
RTN1-209ENST00000611068 SPARCP09486 303 aa14.06□□□□□ -0.16
RTN1-209ENST00000611068 CCL3P10147 92 aa14.06□□□□□ -0.16
RTN1-209ENST00000611068 RPS27P42677 84 aaKnown RBP14.06□□□□□ -0.16
RTN1-209ENST00000611068 RBX1P62877 108 aa14.06□□□□□ -0.16
RTN1-209ENST00000611068 RASGEF1BQ0VAM2 473 aa14.06□□□□□ -0.16
RTN1-209ENST00000611068 GAGE1Q13065 139 aa14.06□□□□□ -0.16
RTN1-209ENST00000611068 Q8WTZ3 238 aa14.06□□□□□ -0.16
RTN1-209ENST00000611068 UPB1Q9UBR1 384 aa14.06□□□□□ -0.16
RTN1-209ENST00000611068 ELOA3CA0A087WX78 387 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms