RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	RNF170	Q96K19	258 aa		18.61	■□□□□ 0.57
LTBP4-227	ENST00000600026	PPP1R3E	Q9H7J1	279 aa		18.61	■□□□□ 0.57
LTBP4-227	ENST00000600026	RSL24D1	Q9UHA3	163 aa	Known RBP	18.61	■□□□□ 0.57
LTBP4-227	ENST00000600026	IGKV1-9	A0A0C4DH69	117 aa		18.6	■□□□□ 0.57
LTBP4-227	ENST00000600026	FAM230A	A0A1W2PPH8	454 aa		18.6	■□□□□ 0.57
LTBP4-227	ENST00000600026	SLC22A1	O15245	554 aa		18.6	■□□□□ 0.57
LTBP4-227	ENST00000600026	ALDOB	P05062	364 aa		18.6	■□□□□ 0.57
LTBP4-227	ENST00000600026	CD55	P08174	381 aa		18.6	■□□□□ 0.57
LTBP4-227	ENST00000600026	SERPINB10	P48595	397 aa		18.6	■□□□□ 0.57
LTBP4-227	ENST00000600026	PSMD7	P51665	324 aa		18.6	■□□□□ 0.57
LTBP4-227	ENST00000600026	ATP1B3	P54709	279 aa		18.6	■□□□□ 0.57
LTBP4-227	ENST00000600026	NCS1	P62166	190 aa		18.6	■□□□□ 0.57
LTBP4-227	ENST00000600026	DDI2	Q5TDH0	399 aa		18.6	■□□□□ 0.57
LTBP4-227	ENST00000600026	LHFPL2	Q6ZUX7	228 aa		18.6	■□□□□ 0.57
LTBP4-227	ENST00000600026	NKAIN3	Q8N8D7	197 aa		18.6	■□□□□ 0.57
LTBP4-227	ENST00000600026	OR51A2	Q8NGJ7	313 aa		18.6	■□□□□ 0.57
LTBP4-227	ENST00000600026	RBM38	Q9H0Z9	239 aa	Known RBP	18.6	■□□□□ 0.57
LTBP4-227	ENST00000600026	ZNF732	B4DXR9	585 aa		18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026		F5H5P2	479 aa		18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	ZNF701	M0R085	212 aa	Predicted RBP	18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	TPD52L2	O43399	206 aa	Known RBP	18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	CDRT1	O95170	752 aa		18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	RAB3B	P20337	219 aa		18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	SDC2	P34741	201 aa		18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	SRP9	P49458	86 aa	Known RBP	18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	RBP2	P50120	134 aa		18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	GPM6A	P51674	278 aa		18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	GNG3	P63215	75 aa		18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	TNFAIP6	P98066	277 aa	Predicted RBP	18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	SPRN	Q5BIV9	151 aa		18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	DMRTC1	Q5HYR2	192 aa		18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	SHE	Q5VZ18	495 aa		18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	GLT8D1	Q68CQ7	371 aa		18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	USP43	Q70EL4	1123 aa		18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	LRRTM1	Q86UE6	522 aa		18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	ZNF525	Q8N782	197 aa		18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	HPSE2	Q8WWQ2	592 aa		18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	SAP30L	Q9HAJ7	183 aa		18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	DECR2	Q9NUI1	292 aa		18.59	■□□□□ 0.57
LTBP4-227	ENST00000600026	TMEM210	A6NLX4	147 aa		18.58	■□□□□ 0.56
LTBP4-227	ENST00000600026	DAO	P14920	347 aa		18.58	■□□□□ 0.56
LTBP4-227	ENST00000600026	TGFBR1	P36897	503 aa		18.58	■□□□□ 0.56
LTBP4-227	ENST00000600026	CD200	P41217	278 aa		18.58	■□□□□ 0.56
LTBP4-227	ENST00000600026	TESK1	Q15569	626 aa		18.58	■□□□□ 0.56
LTBP4-227	ENST00000600026	PRSS57	Q6UWY2	283 aa		18.58	■□□□□ 0.56
LTBP4-227	ENST00000600026	CDH26	Q8IXH8	852 aa		18.58	■□□□□ 0.56
LTBP4-227	ENST00000600026	C12orf43	Q96C57	262 aa	Known RBP	18.58	■□□□□ 0.56
LTBP4-227	ENST00000600026	FOXRED1	Q96CU9	486 aa	Predicted RBP	18.58	■□□□□ 0.56
LTBP4-227	ENST00000600026	DGCR14	Q96DF8	476 aa	Known RBP	18.58	■□□□□ 0.56
LTBP4-227	ENST00000600026	GPER1	Q99527	375 aa		18.58	■□□□□ 0.56
LTBP4-227	ENST00000600026	EGLN1	Q9GZT9	426 aa		18.58	■□□□□ 0.56
LTBP4-227	ENST00000600026	FAM192A	Q9GZU8	254 aa		18.58	■□□□□ 0.56
LTBP4-227	ENST00000600026	IL19	Q9UHD0	177 aa		18.58	■□□□□ 0.56
LTBP4-227	ENST00000600026	AK6	Q9Y3D8	172 aa	Known RBP	18.58	■□□□□ 0.56
LTBP4-227	ENST00000600026	PQLC2L	A1A4F0	135 aa		18.57	■□□□□ 0.56
LTBP4-227	ENST00000600026		A6NHS1	94 aa		18.57	■□□□□ 0.56
LTBP4-227	ENST00000600026		H3BMQ9	156 aa		18.57	■□□□□ 0.56
LTBP4-227	ENST00000600026	IL1A	P01583	271 aa		18.57	■□□□□ 0.56
LTBP4-227	ENST00000600026	MTCP1	P56278	107 aa		18.57	■□□□□ 0.56
LTBP4-227	ENST00000600026	MXD1	Q05195	221 aa		18.57	■□□□□ 0.56
LTBP4-227	ENST00000600026	CLEC12B	Q2HXU8	276 aa		18.57	■□□□□ 0.56
LTBP4-227	ENST00000600026	CELF2-AS1	Q8N7Q2	184 aa		18.57	■□□□□ 0.56
LTBP4-227	ENST00000600026	OR52N4	Q8NGI2	321 aa		18.57	■□□□□ 0.56
LTBP4-227	ENST00000600026	ITLN1	Q8WWA0	313 aa		18.57	■□□□□ 0.56
LTBP4-227	ENST00000600026	OR2V2	Q96R30	315 aa		18.57	■□□□□ 0.56
LTBP4-227	ENST00000600026	MYOZ1	Q9NP98	299 aa	Predicted RBP	18.57	■□□□□ 0.56
LTBP4-227	ENST00000600026	CCDC168	Q8NDH2	2452 aa		18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	SHISA3	A0PJX4	238 aa		18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	LYNX1	G3V0Z9	82 aa		18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	LYNX1	P0DP58	116 aa		18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	ADRA2C	P18825	462 aa		18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	THBS2	P35442	1172 aa		18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	ZNF93	P35789	620 aa	Predicted RBP	18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	KISS1	Q15726	138 aa		18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	DNM1P46	Q6ZS02	220 aa		18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	ZNF573	Q86YE8	665 aa		18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	JAGN1	Q8N5M9	183 aa		18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	PNLDC1	Q8NA58	520 aa	Known RBP	18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	WFDC11	Q8NEX6	87 aa		18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	RDH5	Q92781	318 aa		18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	YIPF5	Q969M3	257 aa		18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	MEGF10	Q96KG7	1140 aa		18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	SPACA5	Q96QH8	159 aa		18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	DCSTAMP	Q9H295	470 aa		18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	METTL17	Q9H7H0	456 aa	Predicted RBP	18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026		V9GY05	133 aa		18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	VPS13C	Q709C8	3753 aa		18.56	■□□□□ 0.56
LTBP4-227	ENST00000600026	DYSF	O75923	2080 aa		18.55	■□□□□ 0.56
LTBP4-227	ENST00000600026	LRP5L	A4QPB2	252 aa		18.55	■□□□□ 0.56
LTBP4-227	ENST00000600026	TRIM64B	A6NI03	449 aa		18.55	■□□□□ 0.56
LTBP4-227	ENST00000600026	GRP	P07492	148 aa		18.55	■□□□□ 0.56
LTBP4-227	ENST00000600026	CSF3	P09919	207 aa		18.55	■□□□□ 0.56
LTBP4-227	ENST00000600026	TNFRSF1A	P19438	455 aa		18.55	■□□□□ 0.56
LTBP4-227	ENST00000600026	RANBP1	P43487	201 aa		18.55	■□□□□ 0.56
LTBP4-227	ENST00000600026	PDLIM4	P50479	330 aa		18.55	■□□□□ 0.56
LTBP4-227	ENST00000600026	MAB21L1	Q13394	359 aa		18.55	■□□□□ 0.56
LTBP4-227	ENST00000600026	CARTPT	Q16568	116 aa		18.55	■□□□□ 0.56
LTBP4-227	ENST00000600026	CLEC2A	Q6UVW9	174 aa		18.55	■□□□□ 0.56
LTBP4-227	ENST00000600026	NDNF	Q8TB73	568 aa		18.55	■□□□□ 0.56
LTBP4-227	ENST00000600026		Q96MF0	132 aa		18.55	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms