RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 KRT74Q7RTS7 529 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 CATSPERDQ86XM0 798 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 OR5T2Q8NGG2 359 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 OR14K1Q8NGZ2 314 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 HPSE2Q8WWQ2 592 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 H1FXQ92522 213 aaKnown RBP11.75□□□□□ -0.53
LIG1-218ENST00000599322 GCDHQ92947 438 aaPredicted RBP11.75□□□□□ -0.53
LIG1-218ENST00000599322 DMRTB1Q96MA1 342 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 RDH12Q96NR8 316 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 PPP1R3EQ9H7J1 279 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 CNTD2Q9H8S5 307 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 GPR173Q9NS66 373 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 SNTG1Q9NSN8 517 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 CTSZQ9UBR2 303 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 ZNF69Q9UC07 566 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 TRAV40A0A0B4J280 105 aa11.74□□□□□ -0.53
LIG1-218ENST00000599322 ANKRD61A6NGH8 418 aa11.74□□□□□ -0.53
LIG1-218ENST00000599322 OR2AT4A6NND4 320 aa11.74□□□□□ -0.53
LIG1-218ENST00000599322 HAX1O00165 279 aa11.74□□□□□ -0.53
LIG1-218ENST00000599322 TNFRSF13BO14836 293 aaPredicted RBP11.74□□□□□ -0.53
LIG1-218ENST00000599322 SRSF10O75494 262 aaKnown RBP11.74□□□□□ -0.53
LIG1-218ENST00000599322 CYB5AP00167 134 aa11.74□□□□□ -0.53
LIG1-218ENST00000599322 HTR1AP08908 422 aa11.74□□□□□ -0.53
LIG1-218ENST00000599322 ZNF20P17024 532 aa11.74□□□□□ -0.53
LIG1-218ENST00000599322 HAAOP46952 286 aa11.74□□□□□ -0.53
LIG1-218ENST00000599322 CAPZA1P52907 286 aa11.74□□□□□ -0.53
LIG1-218ENST00000599322 PAX2Q02962 417 aa11.74□□□□□ -0.53
LIG1-218ENST00000599322 BAMBIQ13145 260 aa11.74□□□□□ -0.53
LIG1-218ENST00000599322 CNN3Q15417 329 aaKnown RBP11.74□□□□□ -0.53
LIG1-218ENST00000599322 SMIM21Q3B7S5 101 aa11.74□□□□□ -0.53
LIG1-218ENST00000599322 TP53I3Q53FA7 332 aa11.74□□□□□ -0.53
LIG1-218ENST00000599322 ATPAF1Q5TC12 328 aaPredicted RBP11.74□□□□□ -0.53
LIG1-218ENST00000599322 SSX6Q7RTT6 188 aa11.74□□□□□ -0.53
LIG1-218ENST00000599322 EGFL6Q8IUX8 553 aa11.74□□□□□ -0.53
LIG1-218ENST00000599322 FAM216AQ8WUB2 273 aa11.74□□□□□ -0.53
LIG1-218ENST00000599322 RORBQ92753 470 aa11.74□□□□□ -0.53
LIG1-218ENST00000599322 UBE2FQ969M7 185 aa11.74□□□□□ -0.53
LIG1-218ENST00000599322 C10orf35Q96D05 121 aa11.74□□□□□ -0.53
LIG1-218ENST00000599322 RPL36Q9Y3U8 105 aaKnown RBP11.74□□□□□ -0.53
LIG1-218ENST00000599322 IGHV3OR16-10A0A075B7F0 116 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 A0A1B0GTI1 187 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 A0A1W2PPH5 198 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 FAM230AA0A1W2PPH8 454 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 IRGMA1A4Y4 181 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 ARHGAP32A7KAX9 2087 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 C22orf46C9J442 243 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 J3QLW9 94 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 J3QT63 122 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 SLC16A6O15403 523 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 ZNF19P17023 458 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 NDUFB7P17568 137 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 FUT6P51993 359 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 ARF6P62330 175 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 HOXA4Q00056 320 aaPredicted RBP11.73□□□□□ -0.53
LIG1-218ENST00000599322 MRPL28Q13084 256 aaKnown RBP11.73□□□□□ -0.53
LIG1-218ENST00000599322 STUMQ69YW2 141 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 NBEAL1Q6ZS30 2694 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 SIGLECL1Q8N7X8 197 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 HAVCR2Q8TDQ0 301 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 GATAD2BQ8WXI9 593 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 PP6455Q8WZ26 134 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 AQP3Q92482 292 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 SLC25A28Q96A46 364 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 BORCS8Q96FH0 119 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 WDFY2Q96P53 400 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 MBOAT4Q96T53 435 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 SMURF1Q9HCE7 757 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 INPP5EQ9NRR6 644 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 FAM118AQ9NWS6 357 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 SMPD3Q9NY59 655 aaPredicted RBP11.73□□□□□ -0.53
LIG1-218ENST00000599322 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.73□□□□□ -0.53
LIG1-218ENST00000599322 ONECUT1Q9UBC0 465 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 SLC25A10Q9UBX3 287 aaPredicted RBP11.73□□□□□ -0.53
LIG1-218ENST00000599322 RPUSD1Q9UJJ7 312 aaKnown RBP11.73□□□□□ -0.53
LIG1-218ENST00000599322 CAB39Q9Y376 341 aaPredicted RBP11.73□□□□□ -0.53
LIG1-218ENST00000599322 KPTNQ9Y664 436 aa11.73□□□□□ -0.53
LIG1-218ENST00000599322 A0A1W2PQ09 198 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 SLC1A7O00341 560 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 NXPH2O95156 264 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 CCL1P22362 96 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 TGM4P49221 684 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 ZNF85Q03923 595 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 RAB40BQ12829 278 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 MED21Q13503 144 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 CDONQ4KMG0 1287 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 KLF17Q5JT82 389 aaPredicted RBP11.72□□□□□ -0.53
LIG1-218ENST00000599322 TTC23Q5W5X9 447 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 FIP1L1Q6UN15 594 aaKnown RBP11.72□□□□□ -0.53
LIG1-218ENST00000599322 ZNF788Q6ZQV5 615 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 FAM216BQ8N7L0 139 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 ZNF676Q8N7Q3 588 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.72□□□□□ -0.53
LIG1-218ENST00000599322 POC1AQ8NBT0 407 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 SETD9Q8NE22 299 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 TMEM185AQ8NFB2 350 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 RHOXF1Q8NHV9 184 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 SLC29A1Q99808 456 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 WDR13Q9H1Z4 485 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 VCXQ9H320 206 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 ACOXLQ9NUZ1 547 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms