RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 FADS2O95864 444 aaKnown RBP11.42□□□□□ -0.58
SCAF1-203ENST00000598359 APOC1P02654 83 aa11.42□□□□□ -0.58
SCAF1-203ENST00000598359 SFTPBP07988 381 aa11.42□□□□□ -0.58
SCAF1-203ENST00000598359 CPT2P23786 658 aa11.42□□□□□ -0.58
SCAF1-203ENST00000598359 GNALP38405 381 aa11.42□□□□□ -0.58
SCAF1-203ENST00000598359 MAP2K4P45985 399 aa11.42□□□□□ -0.58
SCAF1-203ENST00000598359 BAMBIQ13145 260 aa11.42□□□□□ -0.58
SCAF1-203ENST00000598359 SLC35D3Q5M8T2 416 aa11.42□□□□□ -0.58
SCAF1-203ENST00000598359 RBMS3Q6XE24 437 aaKnown RBP11.42□□□□□ -0.58
SCAF1-203ENST00000598359 BRD3OSQ6XYD6 125 aa11.42□□□□□ -0.58
SCAF1-203ENST00000598359 DOK3Q7L591 496 aa11.42□□□□□ -0.58
SCAF1-203ENST00000598359 ZNF454Q8N9F8 522 aa11.42□□□□□ -0.58
SCAF1-203ENST00000598359 OR1M1Q8NGA1 313 aa11.42□□□□□ -0.58
SCAF1-203ENST00000598359 OR8B12Q8NGG6 310 aa11.42□□□□□ -0.58
SCAF1-203ENST00000598359 UPRTQ96BW1 309 aa11.42□□□□□ -0.58
SCAF1-203ENST00000598359 FGF23Q9GZV9 251 aaPredicted RBP11.42□□□□□ -0.58
SCAF1-203ENST00000598359 LAMP5Q9UJQ1 280 aa11.42□□□□□ -0.58
SCAF1-203ENST00000598359 COPS3Q9UNS2 423 aa11.42□□□□□ -0.58
SCAF1-203ENST00000598359 TRAV38-1A0A0B4J264 116 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 ZNF850A8MQ14 1090 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.41□□□□□ -0.58
SCAF1-203ENST00000598359 CDIPTO14735 213 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 LHBP01229 141 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 TFF1P04155 84 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 ALOX5APP20292 161 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 TGFBR2P37173 567 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 PSMA6P60900 246 aaKnown RBP11.41□□□□□ -0.58
SCAF1-203ENST00000598359 MZT1Q08AG7 82 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 PRDX4Q13162 271 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 DYNC1I2Q13409 638 aaKnown RBP11.41□□□□□ -0.58
SCAF1-203ENST00000598359 CTF1Q16619 201 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 DMRTC1Q5HYR2 192 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 RUSC1-AS1Q66K80 236 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 WDR82Q6UXN9 313 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 RHOUQ7L0Q8 258 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 KRT77Q7Z794 578 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 TMEM163Q8TC26 289 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 PIGCQ92535 297 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 RPL3LQ92901 407 aaKnown RBP11.41□□□□□ -0.58
SCAF1-203ENST00000598359 PPP1R14AQ96A00 147 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 ITPKCQ96DU7 683 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 TEAD3Q99594 435 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 CCL13Q99616 98 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 PCGF1Q9BSM1 259 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 MRPS18AQ9NVS2 196 aaKnown RBP11.41□□□□□ -0.58
SCAF1-203ENST00000598359 PKD1L1Q8TDX9 2849 aa11.41□□□□□ -0.58
SCAF1-203ENST00000598359 DVL1O14640 695 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 TMPRSS2O15393 492 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 MAGEB4O15481 346 aaPredicted RBP11.4□□□□□ -0.58
SCAF1-203ENST00000598359 ENSAO43768 121 aaKnown RBP11.4□□□□□ -0.58
SCAF1-203ENST00000598359 ENTPD6O75354 484 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 PLATP00750 562 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 CFL1P23528 166 aaKnown RBP11.4□□□□□ -0.58
SCAF1-203ENST00000598359 PRTN3P24158 256 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 ZNF91Q05481 1191 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 ST3GAL4Q11206 333 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 KCNJ8Q15842 424 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 WDR38Q5JTN6 314 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 ZNF367Q7RTV3 350 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 STX19Q8N4C7 294 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 FAM216BQ8N7L0 139 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 C3orf56Q8N813 242 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 TCEANCQ8N8B7 351 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 CSNK2A3Q8NEV1 391 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 OR5T2Q8NGG2 359 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 ST8SIA4Q92187 359 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 MICU1Q9BPX6 476 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 TEX12Q9BXU0 123 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 RGCCQ9H4X1 137 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 SNTG1Q9NSN8 517 aa11.4□□□□□ -0.58
SCAF1-203ENST00000598359 WARS2Q9UGM6 360 aaKnown RBP11.4□□□□□ -0.58
SCAF1-203ENST00000598359 RPL36Q9Y3U8 105 aaKnown RBP11.4□□□□□ -0.58
SCAF1-203ENST00000598359 MGAM2Q2M2H8 2515 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 IRGMA1A4Y4 181 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 SLC22A1O15245 554 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 PPIAL4GP0DN37 164 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 DBTP11182 482 aaKnown RBP11.39□□□□□ -0.59
SCAF1-203ENST00000598359 SELLP14151 372 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 PSMB9P28065 219 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 C21orf33P30042 268 aaPredicted RBP11.39□□□□□ -0.59
SCAF1-203ENST00000598359 CFHR2P36980 270 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 COMPP49747 757 aaPredicted RBP11.39□□□□□ -0.59
SCAF1-203ENST00000598359 NPY4RP50391 375 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 MFGE8Q08431 387 aaPredicted RBP11.39□□□□□ -0.59
SCAF1-203ENST00000598359 DEFB112Q30KQ8 113 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 AWAT1Q58HT5 328 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 TEX36Q5VZQ5 186 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 BTN2A1Q7KYR7 527 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 HPSE2Q8WWQ2 592 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 OR5P3Q8WZ94 311 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 IL4I1Q96RQ9 567 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 TBX15Q96SF7 602 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 RTL8AQ9BWD3 113 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 WDR13Q9H1Z4 485 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 AMBNQ9NP70 447 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 TRIM36Q9NQ86 728 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 TNFRSF19Q9NS68 423 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 FAM206AQ9NX38 181 aa11.39□□□□□ -0.59
SCAF1-203ENST00000598359 TMEM269A0A1B0GVZ9 245 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 ANXA2P2A6NMY6 339 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms