RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 PRR31Q5SQ13 230 aa13.8□□□□□ -0.2
CROCCP3-203ENST00000589964 PLCXD3Q63HM9 321 aa13.8□□□□□ -0.2
CROCCP3-203ENST00000589964 SHISA2Q6UWI4 295 aa13.8□□□□□ -0.2
CROCCP3-203ENST00000589964 OR10Z1Q8NGY1 313 aa13.8□□□□□ -0.2
CROCCP3-203ENST00000589964 WFDC12Q8WWY7 111 aa13.8□□□□□ -0.2
CROCCP3-203ENST00000589964 C19orf12Q9NSK7 152 aa13.8□□□□□ -0.2
CROCCP3-203ENST00000589964 KPTNQ9Y664 436 aa13.8□□□□□ -0.2
CROCCP3-203ENST00000589964 MEGF11A6BM72 1044 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 F8VVB4 439 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 F8VWA3 439 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 G3V2T6 193 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 NDUFB3O43676 98 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 GPR137BO60478 399 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 ACAA1P09110 424 aaPredicted RBP13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 MAP2K3P46734 347 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 GABRA2P47869 451 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 RIDAP52758 137 aaKnown RBP13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 RAG2P55895 527 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 ESRRGP62508 458 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 GNG3P63215 75 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 IL13RA1P78552 427 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 PDCD1Q15116 288 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 SLC36A1Q7Z2H8 476 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 OR51G2Q8NGK0 314 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 OR14K1Q8NGZ2 314 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 SGMS2Q8NHU3 365 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 C8orf46Q8TAG6 207 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 C12orf43Q96C57 262 aaKnown RBP13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 SLC25A10Q9UBX3 287 aaPredicted RBP13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 AASSQ9UDR5 926 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 OAZ3Q9UMX2 235 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 AP4S1Q9Y587 144 aa13.79□□□□□ -0.2
CROCCP3-203ENST00000589964 A0A1W2PQL4 384 aaPredicted RBP13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 PQLC2LA1A4F0 135 aa13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 LOC110117498-PIK3R3F6TDL0 507 aa13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 RPP14O95059 124 aaKnown RBP13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 ECDO95905 644 aaPredicted RBP13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 NDUFB7P17568 137 aa13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 GLRA1P23415 457 aa13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 IER3P46695 156 aa13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 ZNF684Q5T5D7 378 aa13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 LCN1P1Q5VSP4 162 aa13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 C1orf146Q5VVC0 180 aa13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 TMEM42Q69YG0 159 aa13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 KCTD18Q6PI47 426 aaPredicted RBP13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 DEGS2Q6QHC5 323 aa13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 ANGPTL5Q86XS5 388 aa13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 ELMOD2Q8IZ81 293 aa13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 NPRL2Q8WTW4 380 aa13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 DNAJC9Q8WXX5 260 aa13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 MROQ9BYG7 248 aa13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 NOX4Q9NPH5 578 aa13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 OR52A1Q9UKL2 312 aa13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 R4GMQ9 66 aa13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 V9GYS6 101 aa13.78□□□□□ -0.2
CROCCP3-203ENST00000589964 IGKV1-27A0A075B6S5 117 aa13.77□□□□□ -0.21
CROCCP3-203ENST00000589964 NKX6-3A6NJ46 265 aa13.77□□□□□ -0.21
CROCCP3-203ENST00000589964 DHRS3O75911 302 aa13.77□□□□□ -0.21
CROCCP3-203ENST00000589964 SAA4P35542 130 aa13.77□□□□□ -0.21
CROCCP3-203ENST00000589964 ZNF829Q3KNS6 432 aaPredicted RBP13.77□□□□□ -0.21
CROCCP3-203ENST00000589964 LRRC10Q5BKY1 277 aa13.77□□□□□ -0.21
CROCCP3-203ENST00000589964 BCL2L15Q5TBC7 163 aa13.77□□□□□ -0.21
CROCCP3-203ENST00000589964 NXNL2Q5VZ03 156 aa13.77□□□□□ -0.21
CROCCP3-203ENST00000589964 ACP7Q6ZNF0 438 aa13.77□□□□□ -0.21
CROCCP3-203ENST00000589964 RNF144BQ7Z419 303 aa13.77□□□□□ -0.21
CROCCP3-203ENST00000589964 LDLRAD3Q86YD5 345 aa13.77□□□□□ -0.21
CROCCP3-203ENST00000589964 CALHM1Q8IU99 346 aa13.77□□□□□ -0.21
CROCCP3-203ENST00000589964 TMEM185AQ8NFB2 350 aa13.77□□□□□ -0.21
CROCCP3-203ENST00000589964 PYDC1Q8WXC3 89 aa13.77□□□□□ -0.21
CROCCP3-203ENST00000589964 ASB17Q8WXJ9 295 aa13.77□□□□□ -0.21
CROCCP3-203ENST00000589964 DUS3LQ96G46 650 aaKnown RBP13.77□□□□□ -0.21
CROCCP3-203ENST00000589964 RIBC2Q9H4K1 309 aa13.77□□□□□ -0.21
CROCCP3-203ENST00000589964 CLN6Q9NWW5 311 aa13.77□□□□□ -0.21
CROCCP3-203ENST00000589964 NOTCH1P46531 2555 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 A0A1B0GVI7 797 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 ACOD1A6NK06 481 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 RFPL4AA6NLU0 287 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 RFPL4AL1F8VTS6 287 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 H3BNX3 289 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 NPFFO15130 113 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 ZNF254O75437 659 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 MTRF1O75570 445 aaKnown RBP13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 NRASP01111 189 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 HOXB6P17509 224 aaKnown RBP13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 FASP25445 335 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 KIR3DL2P43630 455 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 RIPPLY1Q0D2K3 151 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 ASRGL1Q7L266 308 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 RDH10Q8IZV5 341 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 PRSS35Q8N3Z0 413 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 FTMTQ8N4E7 242 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 C11orf42Q8N5U0 333 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 POC1AQ8NBT0 407 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 OR4M1Q8NGD0 313 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 OR5A2Q8NGI9 324 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 TRMT10AQ8TBZ6 339 aaKnown RBP13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 SSMEM1Q8WWF3 244 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 RORBQ92753 470 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 EME1Q96AY2 570 aa13.76□□□□□ -0.21
CROCCP3-203ENST00000589964 GABARAPL3Q9BY60 117 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms