RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 UQCC2Q9BRT2 126 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 PKIBQ9C010 78 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 OR51I2Q9H344 312 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 LIME1Q9H400 295 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 RHOFQ9HBH0 211 aa12.11□□□□□ -0.47
SKA2-205ENST00000580541 IGKV1-9A0A0C4DH69 117 aa12.1□□□□□ -0.47
SKA2-205ENST00000580541 LOC100289279A0A1B0GTE1 492 aa12.1□□□□□ -0.47
SKA2-205ENST00000580541 DAOP14920 347 aa12.1□□□□□ -0.47
SKA2-205ENST00000580541 THBS2P35442 1172 aa12.1□□□□□ -0.47
SKA2-205ENST00000580541 CFHR2P36980 270 aa12.1□□□□□ -0.47
SKA2-205ENST00000580541 CAPZA1P52907 286 aa12.1□□□□□ -0.47
SKA2-205ENST00000580541 TMEM33P57088 247 aa12.1□□□□□ -0.47
SKA2-205ENST00000580541 DSCR9P59020 149 aa12.1□□□□□ -0.47
SKA2-205ENST00000580541 ZNF181Q2M3W8 571 aa12.1□□□□□ -0.47
SKA2-205ENST00000580541 DEFB113Q30KQ7 82 aa12.1□□□□□ -0.47
SKA2-205ENST00000580541 CLVS1Q8IUQ0 354 aaPredicted RBP12.1□□□□□ -0.47
SKA2-205ENST00000580541 CROCCP3Q8IVE0 287 aa12.1□□□□□ -0.47
SKA2-205ENST00000580541 ZSCAN4Q8NAM6 433 aaPredicted RBP12.1□□□□□ -0.47
SKA2-205ENST00000580541 OR10Z1Q8NGY1 313 aa12.1□□□□□ -0.47
SKA2-205ENST00000580541 ZNF420Q8TAQ5 688 aaPredicted RBP12.1□□□□□ -0.47
SKA2-205ENST00000580541 Q8TCH9 128 aa12.1□□□□□ -0.47
SKA2-205ENST00000580541 DVL3Q92997 716 aaPredicted RBP12.1□□□□□ -0.47
SKA2-205ENST00000580541 TLNRD1Q9H1K6 362 aa12.1□□□□□ -0.47
SKA2-205ENST00000580541 GCM1Q9NP62 436 aa12.1□□□□□ -0.47
SKA2-205ENST00000580541 TRAV8-7A0A075B6U6 113 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 hCG_1807616A0A1W2PRN6 198 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 J3QT63 122 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 TMEM127O75204 238 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 ACAA1P09110 424 aaPredicted RBP12.09□□□□□ -0.47
SKA2-205ENST00000580541 TMEM225BP0DP42 221 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 RAB3BP20337 219 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 PTH2RP49190 550 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 BMXP51813 675 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 IL24Q13007 206 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 ZNF154Q13106 437 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 RIN1Q13671 783 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 GPR176Q14439 515 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 FAM27D1Q5T7N8 215 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 HAGHLQ6PII5 290 aaPredicted RBP12.09□□□□□ -0.47
SKA2-205ENST00000580541 MOGAT3Q86VF5 341 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 Q8IYB0 196 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 SAXO1Q8IYX7 474 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 JAGN1Q8N5M9 183 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 SCCPDHQ8NBX0 429 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 OR52N4Q8NGI2 321 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 CCL17Q92583 94 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 NRGNQ92686 78 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 TIMD4Q96H15 378 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 PPIL3Q9H2H8 161 aaKnown RBP12.09□□□□□ -0.47
SKA2-205ENST00000580541 METTL17Q9H7H0 456 aaPredicted RBP12.09□□□□□ -0.47
SKA2-205ENST00000580541 PPP1R3EQ9H7J1 279 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 UFSP2Q9NUQ7 469 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 C1orf123Q9NWV4 160 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 RNF7Q9UBF6 113 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 GHRLQ9UBU3 117 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 V9GY05 133 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 CENPEQ02224 2701 aa12.09□□□□□ -0.47
SKA2-205ENST00000580541 DCHS2Q6V1P9 2916 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 DYSFO75923 2080 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 SMIM31A0A1B0GVY4 71 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 CCDC160A6NGH7 325 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 TRAPPC2LH3BP13 241 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 CDIPTO14735 213 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 ZNF780AO75290 641 aaPredicted RBP12.08□□□□□ -0.48
SKA2-205ENST00000580541 GABARAPO95166 117 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 HPXP02790 462 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 PTGFRP43088 359 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 PDLIM4P50479 330 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 PDZK1IP1Q13113 114 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 KCNJ8Q15842 424 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 CDH24Q86UP0 819 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 OR51A2Q8NGJ7 313 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 OR51F2Q8NH61 342 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 RPL3LQ92901 407 aaKnown RBP12.08□□□□□ -0.48
SKA2-205ENST00000580541 ORAI1Q96D31 301 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 CENPOQ9BU64 300 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 CHODLQ9H9P2 273 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 RASL12Q9NYN1 266 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 NPTNQ9Y639 398 aa12.08□□□□□ -0.48
SKA2-205ENST00000580541 CLDN25C9JDP6 229 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 NDUFS8O00217 210 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 SLC22A1O15245 554 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 SSX4O60224 188 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 CDC14BO60729 498 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 IL1AP01583 271 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 UBBP0CG47 229 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 MPZP25189 248 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 SDC2P34741 201 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 POU3F4P49335 361 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 LSM3P62310 102 aaKnown RBP12.07□□□□□ -0.48
SKA2-205ENST00000580541 MPPED2Q15777 294 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 DMRTC1Q5HYR2 192 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 PRAMEF6Q5VXH4 476 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 ASPHD2Q6ICH7 369 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 FIP1L1Q6UN15 594 aaKnown RBP12.07□□□□□ -0.48
SKA2-205ENST00000580541 CLEC2AQ6UVW9 174 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 USP43Q70EL4 1123 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 LRRTM1Q86UE6 522 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 ANGPTL5Q86XS5 388 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 PXT1Q8NFP0 134 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms