RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 KCTD7Q96MP8 289 aa13.45□□□□□ -0.26
CSNK1D-212ENST00000580061 SPACA5Q96QH8 159 aa13.45□□□□□ -0.26
CSNK1D-212ENST00000580061 TLNRD1Q9H1K6 362 aa13.45□□□□□ -0.26
CSNK1D-212ENST00000580061 GCM1Q9NP62 436 aa13.45□□□□□ -0.26
CSNK1D-212ENST00000580061 DNASE1P24855 282 aa13.44□□□□□ -0.26
CSNK1D-212ENST00000580061 TGFBR1P36897 503 aa13.44□□□□□ -0.26
CSNK1D-212ENST00000580061 HAAOP46952 286 aa13.44□□□□□ -0.26
CSNK1D-212ENST00000580061 MTNR1BP49286 362 aa13.44□□□□□ -0.26
CSNK1D-212ENST00000580061 EFNA4P52798 201 aa13.44□□□□□ -0.26
CSNK1D-212ENST00000580061 MOGAT3Q86VF5 341 aa13.44□□□□□ -0.26
CSNK1D-212ENST00000580061 LYPD6Q86Y78 171 aa13.44□□□□□ -0.26
CSNK1D-212ENST00000580061 ZNF573Q86YE8 665 aa13.44□□□□□ -0.26
CSNK1D-212ENST00000580061 CDH26Q8IXH8 852 aa13.44□□□□□ -0.26
CSNK1D-212ENST00000580061 NINJ1Q92982 152 aa13.44□□□□□ -0.26
CSNK1D-212ENST00000580061 ERGIC1Q969X5 290 aa13.44□□□□□ -0.26
CSNK1D-212ENST00000580061 UFSP2Q9NUQ7 469 aa13.44□□□□□ -0.26
CSNK1D-212ENST00000580061 TRIM64BA6NI03 449 aa13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 CDIPTO14735 213 aa13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 ANKRD17O75179 2603 aaKnown RBP13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 LY6HO94772 140 aa13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 IGHV4-39P01824 125 aa13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 ZNF93P35789 620 aaPredicted RBP13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 PMELP40967 661 aa13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 PTH2RP49190 550 aa13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 TMBIM6P55061 237 aa13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 VBP1P61758 197 aa13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 NCS1P62166 190 aa13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 HAGHLQ6PII5 290 aaPredicted RBP13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 ANGPTL5Q86XS5 388 aa13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 SCCPDHQ8NBX0 429 aa13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 ZNF420Q8TAQ5 688 aaPredicted RBP13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 RFT1Q96AA3 541 aa13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 MBD6Q96DN6 1003 aa13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 CPNE2Q96FN4 548 aaPredicted RBP13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 GFI1Q99684 422 aa13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 GSX2Q9BZM3 304 aa13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 METTL17Q9H7H0 456 aaPredicted RBP13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 FN3KRPQ9HA64 309 aa13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 BEX4Q9NWD9 120 aaPredicted RBP13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 PPP1R3CQ9UQK1 317 aa13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 AK6Q9Y3D8 172 aaKnown RBP13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 CACNG2Q9Y698 323 aa13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 CEPT1Q9Y6K0 416 aa13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 ASH1LQ9NR48 2969 aaKnown RBP13.43□□□□□ -0.26
CSNK1D-212ENST00000580061 IGHV1-69-2A0A0G2JMI3 117 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 A6NLC8 198 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 J3QT63 122 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 PDCD5O14737 125 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 CDC14BO60729 498 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 CD37P11049 281 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 DAOP14920 347 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 COL8A2P25067 703 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 MPZP25189 248 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 SDC2P34741 201 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 ZP1P60852 638 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 MRPS11P82912 194 aaKnown RBP13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 DEFB113Q30KQ7 82 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 WDR82Q6UXN9 313 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 ZNF826PQ6ZT77 177 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 TPRA1Q86W33 373 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 TGIF2LYQ8IUE0 185 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 Q8TCH9 128 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 RAB2BQ8WUD1 216 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 AQP3Q92482 292 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 RDH5Q92781 318 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 YIPF5Q969M3 257 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 GPER1Q99527 375 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 NKX3-1Q99801 234 aaPredicted RBP13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 BCL7BQ9BQE9 202 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 PKIBQ9C010 78 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 RBM38Q9H0Z9 239 aaKnown RBP13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 C1orf123Q9NWV4 160 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 TREM2Q9NZC2 230 aa13.42□□□□□ -0.26
CSNK1D-212ENST00000580061 ITPR2Q14571 2701 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 POLQO75417 2590 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 LYNX1G3V0Z9 82 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 SYNGR1O43759 233 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 RHBDL1O75783 438 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 CDRT1O95170 752 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 PLATP00750 562 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 LYNX1P0DP58 116 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 RAB3BP20337 219 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 RBMXP38159 391 aaKnown RBP13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 PSMD7P51665 324 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 ATP5J2P56134 94 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 OR10A3P58181 314 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 IL24Q13007 206 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 PDZK1IP1Q13113 114 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 HNRNPA0Q13151 305 aaKnown RBP13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 ZNF181Q2M3W8 571 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 GLT8D1Q68CQ7 371 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 JAGN1Q8N5M9 183 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 OR5D18Q8NGL1 313 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 ISOC1Q96CN7 298 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 FOXRED1Q96CU9 486 aaPredicted RBP13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 PERPQ96FX8 193 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 UQCC2Q9BRT2 126 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 CNTD2Q9H8S5 307 aa13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 BARX1Q9HBU1 254 aaPredicted RBP13.41□□□□□ -0.26
CSNK1D-212ENST00000580061 DLL4Q9NR61 685 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms