RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 TNFRSF13BO14836 293 aaPredicted RBP18.5■□□□□ 0.55
SMARCD2-206ENST00000577990 GYPAP02724 150 aa18.5■□□□□ 0.55
SMARCD2-206ENST00000577990 ISG15P05161 165 aa18.5■□□□□ 0.55
SMARCD2-206ENST00000577990 MUC1P15941 1255 aaPredicted RBP18.5■□□□□ 0.55
SMARCD2-206ENST00000577990 SRP14P37108 136 aaKnown RBP18.5■□□□□ 0.55
SMARCD2-206ENST00000577990 MICBQ29980 383 aa18.5■□□□□ 0.55
SMARCD2-206ENST00000577990 C10orf35Q96D05 121 aa18.5■□□□□ 0.55
SMARCD2-206ENST00000577990 TMPRSS13Q9BYE2 586 aa18.5■□□□□ 0.55
SMARCD2-206ENST00000577990 CLN8Q9UBY8 286 aa18.5■□□□□ 0.55
SMARCD2-206ENST00000577990 DIMT1Q9UNQ2 313 aaKnown RBP18.5■□□□□ 0.55
SMARCD2-206ENST00000577990 OR4C45A6NMZ5 311 aa18.49■□□□□ 0.55
SMARCD2-206ENST00000577990 TRAPPC2LH3BP13 241 aa18.49■□□□□ 0.55
SMARCD2-206ENST00000577990 ADAM20O43506 726 aa18.49■□□□□ 0.55
SMARCD2-206ENST00000577990 GBX2P52951 348 aaPredicted RBP18.49■□□□□ 0.55
SMARCD2-206ENST00000577990 AQP4P55087 323 aa18.49■□□□□ 0.55
SMARCD2-206ENST00000577990 WDR25Q64LD2 544 aaPredicted RBP18.49■□□□□ 0.55
SMARCD2-206ENST00000577990 HAGHLQ6PII5 290 aaPredicted RBP18.49■□□□□ 0.55
SMARCD2-206ENST00000577990 HAVCR2Q8TDQ0 301 aa18.49■□□□□ 0.55
SMARCD2-206ENST00000577990 FBLIM1Q8WUP2 373 aa18.49■□□□□ 0.55
SMARCD2-206ENST00000577990 CHST5Q9GZS9 411 aa18.49■□□□□ 0.55
SMARCD2-206ENST00000577990 MMP26Q9NRE1 261 aa18.49■□□□□ 0.55
SMARCD2-206ENST00000577990 CTSZQ9UBR2 303 aa18.49■□□□□ 0.55
SMARCD2-206ENST00000577990 EXOSC1Q9Y3B2 195 aaKnown RBP18.49■□□□□ 0.55
SMARCD2-206ENST00000577990 PQLC2LA1A4F0 135 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 AKR7A2O43488 359 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 RHBDL1O75783 438 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 GATBO75879 557 aaKnown RBP18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 MYL12AP19105 171 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 NPY4RP50391 375 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 ETV1P50549 477 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 GMFBP60983 142 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 LAIR2Q6ISS4 152 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 ZNF841Q6ZN19 808 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 ZNF573Q86YE8 665 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 PHC2Q8IXK0 858 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 TEX29Q8N6K0 151 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 ZNF676Q8N7Q3 588 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 SPATA3Q8NHX4 192 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 ZNF671Q8TAW3 534 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 AQP3Q92482 292 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 GGHQ92820 318 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 C12orf43Q96C57 262 aaKnown RBP18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 SEH1LQ96EE3 360 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 TMEM80Q96HE8 168 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 WDR13Q9H1Z4 485 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 VCX3BQ9H321 246 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 ERVK-18Q9QC07 812 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 HHLA2Q9UM44 414 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 SLC7A11Q9UPY5 501 aa18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 CAB39Q9Y376 341 aaPredicted RBP18.48■□□□□ 0.55
SMARCD2-206ENST00000577990 E9PI62 339 aa18.47■□□□□ 0.55
SMARCD2-206ENST00000577990 J3QT63 122 aa18.47■□□□□ 0.55
SMARCD2-206ENST00000577990 SERPINA3P01011 423 aa18.47■□□□□ 0.55
SMARCD2-206ENST00000577990 AVPP01185 164 aa18.47■□□□□ 0.55
SMARCD2-206ENST00000577990 CCDC159P0C7I6 412 aa18.47■□□□□ 0.55
SMARCD2-206ENST00000577990 PIPP12273 146 aaPredicted RBP18.47■□□□□ 0.55
SMARCD2-206ENST00000577990 TGM4P49221 684 aa18.47■□□□□ 0.55
SMARCD2-206ENST00000577990 SRSF2Q01130 221 aaKnown RBP18.47■□□□□ 0.55
SMARCD2-206ENST00000577990 TMPRSS11AQ6ZMR5 421 aa18.47■□□□□ 0.55
SMARCD2-206ENST00000577990 C1orf229Q6ZS94 237 aaPredicted RBP18.47■□□□□ 0.55
SMARCD2-206ENST00000577990 PP6455Q8WZ26 134 aa18.47■□□□□ 0.55
SMARCD2-206ENST00000577990 TECTBQ96PL2 329 aa18.47■□□□□ 0.55
SMARCD2-206ENST00000577990 C7orf69Q9H7B7 122 aa18.47■□□□□ 0.55
SMARCD2-206ENST00000577990 DNAJB11Q9UBS4 358 aa18.47■□□□□ 0.55
SMARCD2-206ENST00000577990 INSIG2Q9Y5U4 225 aa18.47■□□□□ 0.55
SMARCD2-206ENST00000577990 EFCAB10A6NFE3 127 aa18.46■□□□□ 0.55
SMARCD2-206ENST00000577990 ZNF20P17024 532 aa18.46■□□□□ 0.55
SMARCD2-206ENST00000577990 GLRA1P23415 457 aa18.46■□□□□ 0.55
SMARCD2-206ENST00000577990 HAAOP46952 286 aa18.46■□□□□ 0.55
SMARCD2-206ENST00000577990 PAX2Q02962 417 aa18.46■□□□□ 0.55
SMARCD2-206ENST00000577990 MED21Q13503 144 aa18.46■□□□□ 0.55
SMARCD2-206ENST00000577990 UBE2V2Q15819 145 aa18.46■□□□□ 0.55
SMARCD2-206ENST00000577990 OR10AC1Q8NH08 325 aa18.46■□□□□ 0.55
SMARCD2-206ENST00000577990 TRMT10AQ8TBZ6 339 aaKnown RBP18.46■□□□□ 0.55
SMARCD2-206ENST00000577990 NPRL2Q8WTW4 380 aa18.46■□□□□ 0.55
SMARCD2-206ENST00000577990 ADAT3Q96EY9 351 aaPredicted RBP18.46■□□□□ 0.55
SMARCD2-206ENST00000577990 PLCXD1Q9NUJ7 323 aa18.46■□□□□ 0.55
SMARCD2-206ENST00000577990 CHCHD3Q9NX63 227 aaKnown RBP18.46■□□□□ 0.55
SMARCD2-206ENST00000577990 CNOT2Q9NZN8 540 aaKnown RBP18.46■□□□□ 0.55
SMARCD2-206ENST00000577990 KAAG1Q9UBP8 84 aa18.46■□□□□ 0.55
SMARCD2-206ENST00000577990 OPN4Q9UHM6 478 aa18.46■□□□□ 0.55
SMARCD2-206ENST00000577990 LOC105371242A0A075B767 164 aa18.45■□□□□ 0.54
SMARCD2-206ENST00000577990 IGHV2-70DA0A0C4DH43 119 aa18.45■□□□□ 0.54
SMARCD2-206ENST00000577990 FAM230AA0A1W2PPH8 454 aa18.45■□□□□ 0.54
SMARCD2-206ENST00000577990 TMEM212A6NML5 194 aa18.45■□□□□ 0.54
SMARCD2-206ENST00000577990 TMPRSS2O15393 492 aa18.45■□□□□ 0.54
SMARCD2-206ENST00000577990 XPNPEP2O43895 674 aa18.45■□□□□ 0.54
SMARCD2-206ENST00000577990 RPSAP08865 295 aaKnown RBP18.45■□□□□ 0.54
SMARCD2-206ENST00000577990 ST3GAL4Q11206 333 aa18.45■□□□□ 0.54
SMARCD2-206ENST00000577990 CNN3Q15417 329 aaKnown RBP18.45■□□□□ 0.54
SMARCD2-206ENST00000577990 OR2G6Q5TZ20 316 aa18.45■□□□□ 0.54
SMARCD2-206ENST00000577990 STUMQ69YW2 141 aa18.45■□□□□ 0.54
SMARCD2-206ENST00000577990 OR51A4Q8NGJ6 313 aa18.45■□□□□ 0.54
SMARCD2-206ENST00000577990 OR13C3Q8NGS6 347 aa18.45■□□□□ 0.54
SMARCD2-206ENST00000577990 OR5AK2Q8NH90 309 aa18.45■□□□□ 0.54
SMARCD2-206ENST00000577990 RAB40AQ8WXH6 277 aa18.45■□□□□ 0.54
SMARCD2-206ENST00000577990 FGGYQ96C11 551 aa18.45■□□□□ 0.54
SMARCD2-206ENST00000577990 CCL13Q99616 98 aa18.45■□□□□ 0.54
SMARCD2-206ENST00000577990 COMMD4Q9H0A8 199 aa18.45■□□□□ 0.54
SMARCD2-206ENST00000577990 SNTG1Q9NSN8 517 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms