RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 ZNF823P16415 610 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 BCKDHBP21953 392 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 CXCR1P25024 350 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 ADORA1P30542 326 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 HPCAL1P37235 193 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 MAGEA12P43365 314 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 RPS10P46783 165 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 PPT1P50897 306 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 CDKN2DP55273 166 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 CLDN18P56856 261 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 RPS20P60866 119 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 HMGCS1Q01581 520 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 RGS1Q08116 209 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 BST2Q10589 180 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 TWF1Q12792 350 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 SRSF6Q13247 344 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 ZNF846Q147U1 533 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 PTGES3Q15185 160 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 CYP51A1Q16850 503 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 PGGHGQ32M88 737 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 SLC36A2Q495M3 483 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 GCSAMLQ5JQS6 135 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 SPIN3Q5JUX0 258 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 CLLU1Q5K131 121 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 OR2G6Q5TZ20 316 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 ZNF57Q68EA5 555 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 XKRXQ6PP77 449 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 CBLN3Q6UW01 205 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 TMEM107Q6UX40 140 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 DRAM2Q6UX65 266 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 ACOT7LQ6ZUV0 252 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 DPY19L4Q7Z388 723 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 UNC93AQ86WB7 457 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 CRLF3Q8IUI8 442 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 TRAPPC5Q8IUR0 188 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 MFSD6LQ8IWD5 586 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 LGI3Q8N145 548 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 TMEM251Q8N6I4 163 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 LRRC52Q8N7C0 313 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 ZNF283Q8N7M2 679 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 OR2Z1Q8NG97 314 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 OR4C5Q8NGB2 326 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 OR4F15Q8NGB8 312 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 OR4K2Q8NGD2 314 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 OR1L4Q8NGR5 311 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 ZFP90Q8TF47 636 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 C7orf33Q8WU49 177 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 TCTEX1D2Q8WW35 142 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 PIGCQ92535 297 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 RPL3LQ92901 407 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 C12orf43Q96C57 262 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 YIPF6Q96EC8 236 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 CELF6Q96J87 481 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 LINC00052Q96N35 136 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 OR8B4Q96RC9 309 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 DOK1Q99704 481 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 TIMM29Q9BSF4 260 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 NDUFAF3Q9BU61 184 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 WRAP53Q9BUR4 548 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 C20orf24Q9BUV8 137 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 FTHL17Q9BXU8 183 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 RSPO3Q9BXY4 272 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 ULBP2Q9BZM5 246 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 CHST5Q9GZS9 411 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 ATG10Q9H0Y0 220 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 REEP4Q9H6H4 257 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 UBE2ZQ9H832 354 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 STARD5Q9NSY2 213 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 MCUBQ9NWR8 336 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 EHFQ9NZC4 300 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 COPS7AQ9UBW8 275 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 SCP2D1Q9UJQ7 156 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 GNG8Q9UK08 70 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 FOXJ3Q9UPW0 622 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 BAIAP2Q9UQB8 552 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 SCML2Q9UQR0 700 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 FOXA2Q9Y261 457 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 KLHDC2Q9Y2U9 406 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 AQRO60306 1485 aaKnown RBP eCLIP2.49□□□□□ -2.011e-18■■□□□ 13.7
SMCHD1-202ENST00000577300 ATP10AO60312 1499 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 ARAP1Q96P48 1450 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 FANCD2Q9BXW9 1451 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 ARHGAP35Q9NRY4 1499 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 YTHDC2Q9H6S0 1430 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 CHD5Q8TDI0 1954 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 BICRAQ9NZM4 1560 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 USP47Q96K76 1375 aa2.49□□□□□ -2.01
SMCHD1-202ENST00000577300 KDM5DQ9BY66 1539 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 ZNF532Q9HCE3 1301 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 RIMS1Q86UR5 1692 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 MED14O60244 1454 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 FYCO1Q9BQS8 1478 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 PPIAL4EA0A075B759 164 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 PPIAL4CA0A0B4J2A2 164 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 LRIT2A6NDA9 550 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 CCDC182A6NF36 153 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 FAM74A7A6NL05 159 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 A8MWP6 167 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 C5orf58C9J3I9 102 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 KRBOX1C9JBD0 128 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms