RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 SFXN5Q8TD22 340 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 DDI1Q8WTU0 396 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 DEDD2Q8WXF8 326 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 FLYWCH2Q96CP2 140 aaKnown RBP1.53□□□□□ -2.16
COPS3-213ENST00000577210 ZBED3Q96IU2 234 aaPredicted RBP1.53□□□□□ -2.16
COPS3-213ENST00000577210 ALS2CR12Q96Q35 445 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 OR4K3Q96R72 315 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 METTL26Q96S19 204 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 CDX2Q99626 313 aaPredicted RBP1.53□□□□□ -2.16
COPS3-213ENST00000577210 RBBP8Q99708 897 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 ACBD6Q9BR61 282 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 COA1Q9GZY4 146 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 OR51B5Q9H339 312 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 TREX1Q9NSU2 369 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 DDIT4Q9NX09 232 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 UBAP1Q9NZ09 502 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 CYB5R1Q9UHQ9 305 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 ENOPH1Q9UHY7 261 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 VAX2Q9UIW0 290 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 SCML1Q9UN30 329 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 SIGLEC9Q9Y336 463 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 PPIL1Q9Y3C6 166 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 HES2Q9Y543 173 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 YTHDF2Q9Y5A9 579 aaKnown RBP1.53□□□□□ -2.16
COPS3-213ENST00000577210 ORC6Q9Y5N6 252 aa1.53□□□□□ -2.16
COPS3-213ENST00000577210 SLIT3O75094 1523 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 PTPRTO14522 1441 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 TMEM223A0PJW6 202 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 LRCOL1A6NCL2 159 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 ZNF705GA8MUZ8 300 aaPredicted RBP1.52□□□□□ -2.17
COPS3-213ENST00000577210 RNASEK-C17orf49H0YIS7 233 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 M0QXV9 152 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 DNASE2O00115 360 aaPredicted RBP1.52□□□□□ -2.17
COPS3-213ENST00000577210 TNFRSF11BO00300 401 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 NDUFS5O43920 106 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 CCDC22O60826 627 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 GCM2O75603 506 aaPredicted RBP1.52□□□□□ -2.17
COPS3-213ENST00000577210 RBBP9O75884 186 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 SLC22A5O76082 557 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 YIF1AO95070 293 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 SNAP29O95721 258 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 SLC35E2BP0CK96 405 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 NPY1RP25929 384 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 TEAD1P28347 426 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 CD40LGP29965 261 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 UGT2B10P36537 528 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 P2RY2P41231 377 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 GFERP55789 205 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 ESRRGP62508 458 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 CDK5Q00535 292 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 PNOCQ13519 176 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 FLOT2Q14254 428 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 TRAM1Q15629 374 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 TRIP13Q15645 432 aaPredicted RBP1.52□□□□□ -2.17
COPS3-213ENST00000577210 AVPI1Q5T686 147 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 ERO1BQ86YB8 467 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 CRLF3Q8IUI8 442 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 ZCCHC24Q8N2G6 241 aaKnown RBP1.52□□□□□ -2.17
COPS3-213ENST00000577210 C17orf78Q8N4C9 275 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 OR4K5Q8NGD3 323 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 OR1J4Q8NGS1 313 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 OR13G1Q8NGZ3 307 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 OR10G6Q8NH81 332 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 OR2AE1Q8NHA4 323 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 C15orf40Q8WUR7 153 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 C22orf15Q8WYQ4 148 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 OR5P2Q8WZ92 322 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 NEURL3Q96EH8 262 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 NARS2Q96I59 477 aaKnown RBP1.52□□□□□ -2.17
COPS3-213ENST00000577210 ZNF514Q96K75 400 aaPredicted RBP1.52□□□□□ -2.17
COPS3-213ENST00000577210 SMIM8Q96KF7 97 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 DOK1Q99704 481 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 MED10Q9BTT4 135 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 TMED9Q9BVK6 235 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 SFXN3Q9BWM7 321 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 OR52A5Q9H2C5 316 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 OR52D1Q9H346 318 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 ZNF430Q9H8G1 570 aaPredicted RBP1.52□□□□□ -2.17
COPS3-213ENST00000577210 ABCB9Q9NP78 766 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 HEBP1Q9NRV9 189 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 ZNF355PQ9NSJ1 428 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 TAS2R13Q9NYV9 303 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 MAT2BQ9NZL9 334 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 ANXA10Q9UJ72 324 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 SIGLEC7Q9Y286 467 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 AP3M1Q9Y2T2 418 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 ACOT9Q9Y305 439 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 NOSIPQ9Y314 301 aaKnown RBP1.52□□□□□ -2.17
COPS3-213ENST00000577210 ENPP4Q9Y6X5 453 aa1.52□□□□□ -2.17
COPS3-213ENST00000577210 BRCA1P38398 1863 aaKnown RBP1.52□□□□□ -2.17
COPS3-213ENST00000577210 TNS2Q63HR2 1409 aa1.51□□□□□ -2.17
COPS3-213ENST00000577210 ADAMTS13Q76LX8 1427 aa1.51□□□□□ -2.17
COPS3-213ENST00000577210 IGLV2-18A0A075B6J9 118 aa1.51□□□□□ -2.17
COPS3-213ENST00000577210 C1orf232A0A0U1RR37 186 aa1.51□□□□□ -2.17
COPS3-213ENST00000577210 A0A1W2PQ67 120 aa1.51□□□□□ -2.17
COPS3-213ENST00000577210 C7orf66A4D0T2 115 aa1.51□□□□□ -2.17
COPS3-213ENST00000577210 OR5H1A6NKK0 313 aa1.51□□□□□ -2.17
COPS3-213ENST00000577210 GOLGA8RI6L899 631 aa1.51□□□□□ -2.17
COPS3-213ENST00000577210 M0R1B8 84 aa1.51□□□□□ -2.17
COPS3-213ENST00000577210 BPY2O14599 106 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms