RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 ALDOBP05062 364 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 IRF2P14316 349 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 HAAOP46952 286 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 FAM27D1Q5T7N8 215 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 SHEQ5VZ18 495 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 C1orf87Q8N0U7 546 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 OR51A2Q8NGJ7 313 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 OR13F1Q8NGS4 319 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 ORAI1Q96D31 301 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 SLITRK2Q9H156 845 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 TCF7L1Q9HCS4 588 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 C1orf123Q9NWV4 160 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 CACNG2Q9Y698 323 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 DYSFO75923 2080 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 TRIM64BA6NI03 449 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 CLDN25C9JDP6 229 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 J3QT63 122 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 COL8A2P25067 703 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 BDKRB2P30411 391 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 ART1P52961 327 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 MTCP1P56278 107 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 NOTCH2Q04721 2471 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 HAGHLQ6PII5 290 aaPredicted RBP14.42□□□□□ -0.1
NUP88-210ENST00000574867 DNM1P46Q6ZS02 220 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 NKAIN3Q8N8D7 197 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 SCCPDHQ8NBX0 429 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 ZNF420Q8TAQ5 688 aaPredicted RBP14.42□□□□□ -0.1
NUP88-210ENST00000574867 FAM168AQ92567 244 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 RPL3LQ92901 407 aaKnown RBP14.42□□□□□ -0.1
NUP88-210ENST00000574867 PKIBQ9C010 78 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 SSR3Q9UNL2 185 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 POLDIP2Q9Y2S7 368 aa14.42□□□□□ -0.1
NUP88-210ENST00000574867 SETXQ7Z333 2677 aaKnown RBP14.41□□□□□ -0.1
NUP88-210ENST00000574867 hCG_1807616A0A1W2PRN6 198 aa14.41□□□□□ -0.1
NUP88-210ENST00000574867 LYNX1G3V0Z9 82 aa14.41□□□□□ -0.1
NUP88-210ENST00000574867 CDIPTO14735 213 aa14.41□□□□□ -0.1
NUP88-210ENST00000574867 TFAP2AP05549 437 aa14.41□□□□□ -0.1
NUP88-210ENST00000574867 LYNX1P0DP58 116 aa14.41□□□□□ -0.1
NUP88-210ENST00000574867 MPZP25189 248 aa14.41□□□□□ -0.1
NUP88-210ENST00000574867 GIFP27352 417 aa14.41□□□□□ -0.1
NUP88-210ENST00000574867 FGF9P31371 208 aaPredicted RBP14.41□□□□□ -0.1
NUP88-210ENST00000574867 CFHR2P36980 270 aa14.41□□□□□ -0.1
NUP88-210ENST00000574867 TMEM33P57088 247 aa14.41□□□□□ -0.1
NUP88-210ENST00000574867 CARTPTQ16568 116 aa14.41□□□□□ -0.1
NUP88-210ENST00000574867 WDR82Q6UXN9 313 aa14.41□□□□□ -0.1
NUP88-210ENST00000574867 C11orf53Q8IXP5 236 aa14.41□□□□□ -0.1
NUP88-210ENST00000574867 OR10Z1Q8NGY1 313 aa14.41□□□□□ -0.1
NUP88-210ENST00000574867 AQP3Q92482 292 aa14.41□□□□□ -0.1
NUP88-210ENST00000574867 YIPF6Q96EC8 236 aa14.41□□□□□ -0.1
NUP88-210ENST00000574867 RNF7Q9UBF6 113 aa14.41□□□□□ -0.1
NUP88-210ENST00000574867 IGKV1-27A0A075B6S5 117 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 PMELP40967 661 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 ALDH3B2P48448 385 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 CLEC12BQ2HXU8 276 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 DDI2Q5TDH0 399 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 TIMD4Q96H15 378 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 PIMREGQ9BSJ6 248 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 EXOSC4Q9NPD3 245 aaKnown RBP14.4□□□□□ -0.1
NUP88-210ENST00000574867 TREM2Q9NZC2 230 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 MEGF11A6BM72 1044 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 TMEM178BH3BS89 294 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 SRMP19623 302 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 GADD45AP24522 165 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 CALRP27797 417 aaKnown RBP14.4□□□□□ -0.1
NUP88-210ENST00000574867 IL24Q13007 206 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 RIN1Q13671 783 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 KISS1Q15726 138 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 GDPGP1Q6ZNW5 385 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 PEG10Q86TG7 708 aaKnown RBP14.4□□□□□ -0.1
NUP88-210ENST00000574867 TGIF2LYQ8IUE0 185 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 CDH26Q8IXH8 852 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 ZNF671Q8TAW3 534 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 C10orf105Q8TEF2 133 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 PPIL3Q9H2H8 161 aaKnown RBP14.4□□□□□ -0.1
NUP88-210ENST00000574867 SNTG1Q9NSN8 517 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 GSTK1Q9Y2Q3 226 aa14.4□□□□□ -0.1
NUP88-210ENST00000574867 MAS1P04201 325 aa14.39□□□□□ -0.11
NUP88-210ENST00000574867 RPL5P46777 297 aaKnown RBP14.39□□□□□ -0.11
NUP88-210ENST00000574867 ZNF826PQ6ZT77 177 aa14.39□□□□□ -0.11
NUP88-210ENST00000574867 CALHM1Q8IU99 346 aa14.39□□□□□ -0.11
NUP88-210ENST00000574867 KRTAP1-3Q8IUG1 177 aa14.39□□□□□ -0.11
NUP88-210ENST00000574867 OR52N4Q8NGI2 321 aa14.39□□□□□ -0.11
NUP88-210ENST00000574867 OR51E2Q9H255 320 aa14.39□□□□□ -0.11
NUP88-210ENST00000574867 TXNL4BQ9NX01 149 aaKnown RBP14.39□□□□□ -0.11
NUP88-210ENST00000574867 NPTNQ9Y639 398 aa14.39□□□□□ -0.11
NUP88-210ENST00000574867 CYB5AP00167 134 aa14.38□□□□□ -0.11
NUP88-210ENST00000574867 CYB5R3P00387 301 aaPredicted RBP14.38□□□□□ -0.11
NUP88-210ENST00000574867 MYL9P24844 172 aa14.38□□□□□ -0.11
NUP88-210ENST00000574867 ZNF93P35789 620 aaPredicted RBP14.38□□□□□ -0.11
NUP88-210ENST00000574867 C22orf42Q6IC83 251 aa14.38□□□□□ -0.11
NUP88-210ENST00000574867 GPR141Q7Z602 305 aa14.38□□□□□ -0.11
NUP88-210ENST00000574867 ANGPTL5Q86XS5 388 aa14.38□□□□□ -0.11
NUP88-210ENST00000574867 PNLDC1Q8NA58 520 aaKnown RBP14.38□□□□□ -0.11
NUP88-210ENST00000574867 LRRC29Q8WV35 223 aa14.38□□□□□ -0.11
NUP88-210ENST00000574867 RAB1CQ92928 201 aa14.38□□□□□ -0.11
NUP88-210ENST00000574867 SPACA5Q96QH8 159 aa14.38□□□□□ -0.11
NUP88-210ENST00000574867 GPER1Q99527 375 aa14.38□□□□□ -0.11
NUP88-210ENST00000574867 CHCHD6Q9BRQ6 235 aa14.38□□□□□ -0.11
NUP88-210ENST00000574867 METTL17Q9H7H0 456 aaPredicted RBP14.38□□□□□ -0.11
NUP88-210ENST00000574867 PRRC2AP48634 2157 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms