RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 MRPS28Q9Y2Q9 187 aaKnown RBP8.49□□□□□ -1.05
CCDC40-212ENST00000574799 LRP12Q9Y561 859 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 E5RGE8 158 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 CXCL1P09341 107 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 PVRP15151 417 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 FPR2P25090 351 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 HSD11B1P28845 292 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 MESTQ5EB52 335 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 WBP2NLQ6ICG8 309 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 DNM1P46Q6ZS02 220 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 LANCL3Q6ZV70 420 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 HOGA1Q86XE5 327 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 YAF2Q8IY57 180 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 SLC35G3Q8N808 338 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 TMEM52Q8NDY8 209 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 OR5T1Q8NG75 326 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 RPS4Y2Q8TD47 263 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 ERGIC1Q969X5 290 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 NTNG2Q96CW9 530 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 NOL4LQ96MY1 436 aaPredicted RBP8.49□□□□□ -1.05
CCDC40-212ENST00000574799 OR5B12Q96R08 314 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 OR2A5Q96R48 311 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 NICN1Q9BSH3 213 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 NDUFAF3Q9BU61 184 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 NSG2Q9Y328 171 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 HDGFL3Q9Y3E1 203 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 PIAS3Q9Y6X2 628 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 LAMA5O15230 3695 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 FER1L5A0AVI2 2057 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 TRBV6-7A0A0A0MS04 114 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 ABHD16AO95870 558 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 RELQ04864 619 aaPredicted RBP8.49□□□□□ -1.05
CCDC40-212ENST00000574799 TNFRSF9Q07011 255 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 COTL1Q14019 142 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 GPR157Q5UAW9 335 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 DCXRQ7Z4W1 244 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 THNSL2Q86YJ6 484 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 FRZBQ92765 325 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 MALSU1Q96EH3 234 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 CD207Q9UJ71 328 aa8.49□□□□□ -1.05
CCDC40-212ENST00000574799 TNFSF14O43557 240 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 LMX1BO60663 402 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 IGLV3-19P01714 112 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 ZNF708P17019 499 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 ZNF74Q16587 644 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 Q7L0L9 218 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 CYB561D1Q8N8Q1 229 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 EMG1Q92979 244 aaKnown RBP8.48□□□□□ -1.05
CCDC40-212ENST00000574799 DGAT2Q96PD7 388 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 LMF2Q9BU23 707 aaKnown RBP8.48□□□□□ -1.05
CCDC40-212ENST00000574799 NMNAT2Q9BZQ4 307 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 GNG13Q9P2W3 67 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 GPR132Q9UNW8 380 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 COA3Q9Y2R0 106 aaPredicted RBP8.48□□□□□ -1.05
CCDC40-212ENST00000574799 STARD10Q9Y365 291 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 CCDC187A0A096LP49 1063 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 FTCDNL1E5RQL4 147 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 GAPDHP04406 335 aaKnown RBP8.48□□□□□ -1.05
CCDC40-212ENST00000574799 BLVRBP30043 206 aaPredicted RBP8.48□□□□□ -1.05
CCDC40-212ENST00000574799 TAS2R46P59540 309 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 ERV3-1Q14264 604 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 RAB30Q15771 203 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 NKAIN1Q4KMZ8 207 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 PHLDA2Q53GA4 152 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 C1QL4Q86Z23 238 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 TMEM37Q8WXS4 190 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 AQP3Q92482 292 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 RSC1A1Q92681 617 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 SLC22A18Q96BI1 424 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 MUCL1Q96DR8 90 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 TSPAN32Q96QS1 320 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 ADAM19Q9H013 955 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 LAMP3Q9UQV4 416 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 A0A1B0GWJ7 208 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 EREGO14944 169 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 CHRM2P08172 466 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 SEC11BP0C7V7 166 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 FOLR1P15328 257 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 PMS2P11Q13670 270 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 TAF9Q16594 264 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 DEFB110Q30KQ9 67 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 ZNF880Q6PDB4 577 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 FIGLAQ6QHK4 219 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 MRPL24Q96A35 216 aaKnown RBP8.48□□□□□ -1.05
CCDC40-212ENST00000574799 KTI12Q96EK9 354 aaPredicted RBP8.48□□□□□ -1.05
CCDC40-212ENST00000574799 REEP6Q96HR9 211 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 MESP1Q9BRJ9 268 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 PITPNC1Q9UKF7 332 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 TMED3Q9Y3Q3 217 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 RTTNQ86VV8 2226 aa8.48□□□□□ -1.05
CCDC40-212ENST00000574799 NUP210LQ5VU65 1888 aa8.47□□□□□ -1.05
CCDC40-212ENST00000574799 XKRY2A2RUG3 117 aa8.47□□□□□ -1.05
CCDC40-212ENST00000574799 IFITM10A6NMD0 228 aa8.47□□□□□ -1.05
CCDC40-212ENST00000574799 CLDN34H7C241 214 aa8.47□□□□□ -1.05
CCDC40-212ENST00000574799 SOCS1O15524 211 aa8.47□□□□□ -1.05
CCDC40-212ENST00000574799 MPZL1O95297 269 aa8.47□□□□□ -1.05
CCDC40-212ENST00000574799 DANCRP0C864 163 aa8.47□□□□□ -1.05
CCDC40-212ENST00000574799 VSIG8P0DPA2 414 aa8.47□□□□□ -1.05
CCDC40-212ENST00000574799 SLC2A1P11166 492 aa8.47□□□□□ -1.05
CCDC40-212ENST00000574799 APLNRP35414 380 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms