RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 INPP5EQ9NRR6 644 aa17.21■□□□□ 0.35
CHMP6-204ENST00000572778 SNTG1Q9NSN8 517 aa17.21■□□□□ 0.35
CHMP6-204ENST00000572778 MRPS18AQ9NVS2 196 aaKnown RBP17.21■□□□□ 0.35
CHMP6-204ENST00000572778 ERVK13-1Q9NX77 482 aa17.21■□□□□ 0.35
CHMP6-204ENST00000572778 IGHV2-70DA0A0C4DH43 119 aa17.2■□□□□ 0.34
CHMP6-204ENST00000572778 ANKRD61A6NGH8 418 aa17.2■□□□□ 0.34
CHMP6-204ENST00000572778 GLRA1P23415 457 aa17.2■□□□□ 0.34
CHMP6-204ENST00000572778 PAX2Q02962 417 aa17.2■□□□□ 0.34
CHMP6-204ENST00000572778 SCGB2A2Q13296 93 aa17.2■□□□□ 0.34
CHMP6-204ENST00000572778 FDX2Q6P4F2 183 aa17.2■□□□□ 0.34
CHMP6-204ENST00000572778 AQP3Q92482 292 aa17.2■□□□□ 0.34
CHMP6-204ENST00000572778 NUDT16L1Q9BRJ7 211 aaKnown RBP17.2■□□□□ 0.34
CHMP6-204ENST00000572778 VCXQ9H320 206 aa17.2■□□□□ 0.34
CHMP6-204ENST00000572778 ISG20L2Q9H9L3 353 aaKnown RBP17.2■□□□□ 0.34
CHMP6-204ENST00000572778 NKX1-2Q9UD57 310 aaPredicted RBP17.2■□□□□ 0.34
CHMP6-204ENST00000572778 CUBNO60494 3623 aa17.2■□□□□ 0.34
CHMP6-204ENST00000572778 DVL1O14640 695 aa17.19■□□□□ 0.34
CHMP6-204ENST00000572778 HAAOP46952 286 aa17.19■□□□□ 0.34
CHMP6-204ENST00000572778 PAX8Q06710 450 aa17.19■□□□□ 0.34
CHMP6-204ENST00000572778 CD276Q5ZPR3 534 aa17.19■□□□□ 0.34
CHMP6-204ENST00000572778 SLC36A1Q7Z2H8 476 aa17.19■□□□□ 0.34
CHMP6-204ENST00000572778 ZNF573Q86YE8 665 aa17.19■□□□□ 0.34
CHMP6-204ENST00000572778 SYS1Q8N2H4 156 aa17.19■□□□□ 0.34
CHMP6-204ENST00000572778 TRMT10AQ8TBZ6 339 aaKnown RBP17.19■□□□□ 0.34
CHMP6-204ENST00000572778 NPRL2Q8WTW4 380 aa17.19■□□□□ 0.34
CHMP6-204ENST00000572778 C12orf43Q96C57 262 aaKnown RBP17.19■□□□□ 0.34
CHMP6-204ENST00000572778 MDFIQ99750 246 aa17.19■□□□□ 0.34
CHMP6-204ENST00000572778 SMURF1Q9HCE7 757 aa17.19■□□□□ 0.34
CHMP6-204ENST00000572778 KAAG1Q9UBP8 84 aa17.19■□□□□ 0.34
CHMP6-204ENST00000572778 SLC7A11Q9UPY5 501 aa17.19■□□□□ 0.34
CHMP6-204ENST00000572778 KIR2DS1A0A191URI9 304 aa17.18■□□□□ 0.34
CHMP6-204ENST00000572778 PQLC2LA1A4F0 135 aa17.18■□□□□ 0.34
CHMP6-204ENST00000572778 C22orf46C9J442 243 aa17.18■□□□□ 0.34
CHMP6-204ENST00000572778 SERPINA3P01011 423 aa17.18■□□□□ 0.34
CHMP6-204ENST00000572778 EPHA1P21709 976 aa17.18■□□□□ 0.34
CHMP6-204ENST00000572778 CAPGP40121 348 aa17.18■□□□□ 0.34
CHMP6-204ENST00000572778 CCR9P51686 369 aa17.18■□□□□ 0.34
CHMP6-204ENST00000572778 SLC34A1Q06495 639 aa17.18■□□□□ 0.34
CHMP6-204ENST00000572778 IL18R1Q13478 541 aa17.18■□□□□ 0.34
CHMP6-204ENST00000572778 ALKBH1Q13686 389 aaKnown RBP17.18■□□□□ 0.34
CHMP6-204ENST00000572778 ZNF676Q8N7Q3 588 aa17.18■□□□□ 0.34
CHMP6-204ENST00000572778 ST8SIA4Q92187 359 aa17.18■□□□□ 0.34
CHMP6-204ENST00000572778 TMIGD2Q96BF3 282 aa17.18■□□□□ 0.34
CHMP6-204ENST00000572778 ZNF649Q9BS31 505 aa17.18■□□□□ 0.34
CHMP6-204ENST00000572778 FGF20Q9NP95 211 aaPredicted RBP17.18■□□□□ 0.34
CHMP6-204ENST00000572778 A0A1B0GW55 424 aa17.17■□□□□ 0.34
CHMP6-204ENST00000572778 FAM230AA0A1W2PPH8 454 aa17.17■□□□□ 0.34
CHMP6-204ENST00000572778 GATBO75879 557 aaKnown RBP17.17■□□□□ 0.34
CHMP6-204ENST00000572778 DUX4L2P0CJ85 424 aa17.17■□□□□ 0.34
CHMP6-204ENST00000572778 DUX4L3P0CJ86 424 aa17.17■□□□□ 0.34
CHMP6-204ENST00000572778 DUX4L4P0CJ87 422 aa17.17■□□□□ 0.34
CHMP6-204ENST00000572778 DUX4L5P0CJ88 424 aa17.17■□□□□ 0.34
CHMP6-204ENST00000572778 DUX4L6P0CJ89 424 aa17.17■□□□□ 0.34
CHMP6-204ENST00000572778 DUX4L7P0CJ90 424 aa17.17■□□□□ 0.34
CHMP6-204ENST00000572778 SRSF2Q01130 221 aaKnown RBP17.17■□□□□ 0.34
CHMP6-204ENST00000572778 IKZF1Q13422 519 aa17.17■□□□□ 0.34
CHMP6-204ENST00000572778 UBE2V2Q15819 145 aa17.17■□□□□ 0.34
CHMP6-204ENST00000572778 ARMCX4Q5H9R4 360 aa17.17■□□□□ 0.34
CHMP6-204ENST00000572778 STUMQ69YW2 141 aa17.17■□□□□ 0.34
CHMP6-204ENST00000572778 DUX4L9Q6RFH8 374 aaPredicted RBP17.17■□□□□ 0.34
CHMP6-204ENST00000572778 EGFL6Q8IUX8 553 aa17.17■□□□□ 0.34
CHMP6-204ENST00000572778 DACT3Q96B18 629 aaPredicted RBP17.17■□□□□ 0.34
CHMP6-204ENST00000572778 NLKQ9UBE8 527 aa17.17■□□□□ 0.34
CHMP6-204ENST00000572778 DUX4Q9UBX2 424 aa17.17■□□□□ 0.34
CHMP6-204ENST00000572778 ARHGAP32A7KAX9 2087 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 RNF212BA8MTL3 300 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 H0YAE9 185 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 J3QT63 122 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 NDUFB3O43676 98 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 TCF21O43680 179 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 SYNGR1O43759 233 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 ENSAO43768 121 aaKnown RBP17.16■□□□□ 0.34
CHMP6-204ENST00000572778 TFF1P04155 84 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 ISG15P05161 165 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 GNAO1P09471 354 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 DCKP27707 260 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 GBX2P52951 348 aaPredicted RBP17.16■□□□□ 0.34
CHMP6-204ENST00000572778 BTN2A1Q7KYR7 527 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 C8orf59Q8N0T1 100 aaPredicted RBP17.16■□□□□ 0.34
CHMP6-204ENST00000572778 FAM216BQ8N7L0 139 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 FGGYQ96C11 551 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 C10orf35Q96D05 121 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 ZNF488Q96MN9 340 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 CHST5Q9GZS9 411 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 HHLA2Q9UM44 414 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 POLDIP2Q9Y2S7 368 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 HSPE1-MOB4S4R3N1 261 aa17.16■□□□□ 0.34
CHMP6-204ENST00000572778 IRGMA1A4Y4 181 aa17.15■□□□□ 0.34
CHMP6-204ENST00000572778 NKX6-3A6NJ46 265 aa17.15■□□□□ 0.34
CHMP6-204ENST00000572778 OR4C45A6NMZ5 311 aa17.15■□□□□ 0.34
CHMP6-204ENST00000572778 OR2AT4A6NND4 320 aa17.15■□□□□ 0.34
CHMP6-204ENST00000572778 E9PI62 339 aa17.15■□□□□ 0.34
CHMP6-204ENST00000572778 FCN3O75636 299 aa17.15■□□□□ 0.34
CHMP6-204ENST00000572778 RGS9O75916 674 aaPredicted RBP17.15■□□□□ 0.34
CHMP6-204ENST00000572778 FSHBP01225 129 aa17.15■□□□□ 0.34
CHMP6-204ENST00000572778 LIMS3P0CW19 117 aa17.15■□□□□ 0.34
CHMP6-204ENST00000572778 LIMS4P0CW20 117 aa17.15■□□□□ 0.34
CHMP6-204ENST00000572778 ZNF20P17024 532 aa17.15■□□□□ 0.34
CHMP6-204ENST00000572778 AMY2BP19961 511 aa17.15■□□□□ 0.34
CHMP6-204ENST00000572778 GABRA2P47869 451 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms