RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 MAP2K3P46734 347 aa14.81□□□□□ -0.04
CHD3-214ENST00000572579 PROK1P58294 105 aa14.81□□□□□ -0.04
CHD3-214ENST00000572579 GNG3P63215 75 aa14.81□□□□□ -0.04
CHD3-214ENST00000572579 DNAL1Q4LDG9 190 aa14.81□□□□□ -0.04
CHD3-214ENST00000572579 PLEKHG7Q6ZR37 379 aa14.81□□□□□ -0.04
CHD3-214ENST00000572579 Q6ZSV7 163 aa14.81□□□□□ -0.04
CHD3-214ENST00000572579 MOB3CQ70IA8 216 aa14.81□□□□□ -0.04
CHD3-214ENST00000572579 C11orf42Q8N5U0 333 aa14.81□□□□□ -0.04
CHD3-214ENST00000572579 CD177Q8N6Q3 437 aa14.81□□□□□ -0.04
CHD3-214ENST00000572579 ZSCAN4Q8NAM6 433 aaPredicted RBP14.81□□□□□ -0.04
CHD3-214ENST00000572579 DUS3LQ96G46 650 aaKnown RBP14.81□□□□□ -0.04
CHD3-214ENST00000572579 YY1AP1Q9H869 796 aa14.81□□□□□ -0.04
CHD3-214ENST00000572579 ABCB9Q9NP78 766 aa14.81□□□□□ -0.04
CHD3-214ENST00000572579 ZNRD1Q9P1U0 126 aa14.81□□□□□ -0.04
CHD3-214ENST00000572579 NUFIP1Q9UHK0 495 aaKnown RBP14.81□□□□□ -0.04
CHD3-214ENST00000572579 MEGF11A6BM72 1044 aa14.8□□□□□ -0.04
CHD3-214ENST00000572579 SYNGR1O43759 233 aa14.8□□□□□ -0.04
CHD3-214ENST00000572579 HOXB6P17509 224 aaKnown RBP14.8□□□□□ -0.04
CHD3-214ENST00000572579 GLRA1P23415 457 aa14.8□□□□□ -0.04
CHD3-214ENST00000572579 GABRA2P47869 451 aa14.8□□□□□ -0.04
CHD3-214ENST00000572579 CAV3P56539 151 aa14.8□□□□□ -0.04
CHD3-214ENST00000572579 ERVFRD-1P60508 538 aa14.8□□□□□ -0.04
CHD3-214ENST00000572579 TMEM42Q69YG0 159 aa14.8□□□□□ -0.04
CHD3-214ENST00000572579 ASPHD2Q6ICH7 369 aa14.8□□□□□ -0.04
CHD3-214ENST00000572579 C1orf122Q6ZSJ8 110 aa14.8□□□□□ -0.04
CHD3-214ENST00000572579 MEPCEQ7L2J0 689 aaKnown RBP14.8□□□□□ -0.04
CHD3-214ENST00000572579 OR5A2Q8NGI9 324 aa14.8□□□□□ -0.04
CHD3-214ENST00000572579 FAM81AQ8TBF8 368 aa14.8□□□□□ -0.04
CHD3-214ENST00000572579 BCAS4Q8TDM0 211 aa14.8□□□□□ -0.04
CHD3-214ENST00000572579 SDSLQ96GA7 329 aa14.8□□□□□ -0.04
CHD3-214ENST00000572579 MED30Q96HR3 178 aa14.8□□□□□ -0.04
CHD3-214ENST00000572579 MROQ9BYG7 248 aa14.8□□□□□ -0.04
CHD3-214ENST00000572579 ADGRL4Q9HBW9 690 aa14.8□□□□□ -0.04
CHD3-214ENST00000572579 MRM2Q9UI43 246 aaKnown RBP14.8□□□□□ -0.04
CHD3-214ENST00000572579 PIGLQ9Y2B2 252 aa14.8□□□□□ -0.04
CHD3-214ENST00000572579 NOTCH1P46531 2555 aa14.8□□□□□ -0.04
CHD3-214ENST00000572579 A6NIN4 97 aa14.79□□□□□ -0.04
CHD3-214ENST00000572579 ZNF254O75437 659 aa14.79□□□□□ -0.04
CHD3-214ENST00000572579 MTRF1O75570 445 aaKnown RBP14.79□□□□□ -0.04
CHD3-214ENST00000572579 CLPXO76031 633 aa14.79□□□□□ -0.04
CHD3-214ENST00000572579 NDUFB7P17568 137 aa14.79□□□□□ -0.04
CHD3-214ENST00000572579 PAX6P26367 422 aa14.79□□□□□ -0.04
CHD3-214ENST00000572579 POLR2IP36954 125 aaKnown RBP14.79□□□□□ -0.04
CHD3-214ENST00000572579 RIPPLY1Q0D2K3 151 aa14.79□□□□□ -0.04
CHD3-214ENST00000572579 SLX4IPQ5VYV7 408 aa14.79□□□□□ -0.04
CHD3-214ENST00000572579 C12orf73Q69YU5 71 aa14.79□□□□□ -0.04
CHD3-214ENST00000572579 KCTD18Q6PI47 426 aaPredicted RBP14.79□□□□□ -0.04
CHD3-214ENST00000572579 HAGHLQ6PII5 290 aaPredicted RBP14.79□□□□□ -0.04
CHD3-214ENST00000572579 SSX6Q7RTT6 188 aa14.79□□□□□ -0.04
CHD3-214ENST00000572579 TCEANCQ8N8B7 351 aa14.79□□□□□ -0.04
CHD3-214ENST00000572579 OR5K1Q8NHB7 308 aa14.79□□□□□ -0.04
CHD3-214ENST00000572579 HIST1H2AAQ96QV6 131 aa14.79□□□□□ -0.04
CHD3-214ENST00000572579 C19orf12Q9NSK7 152 aa14.79□□□□□ -0.04
CHD3-214ENST00000572579 FAM96BQ9Y3D0 163 aa14.79□□□□□ -0.04
CHD3-214ENST00000572579 RNF114Q9Y508 228 aa14.79□□□□□ -0.04
CHD3-214ENST00000572579 NKX6-3A6NJ46 265 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 RFPL4AA6NLU0 287 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 ZAR1LA6NP61 321 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 RFPL4AL1F8VTS6 287 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 M0R1W7 72 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 SAA4P35542 130 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 UBE2E1P51965 193 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 CXCR4P61073 352 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 RPL15P61313 204 aaKnown RBP14.78□□□□□ -0.04
CHD3-214ENST00000572579 DEFA6Q01524 100 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 ATP6AP1Q15904 470 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 KDM4DQ6B0I6 523 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 ZNF322Q6U7Q0 402 aaPredicted RBP14.78□□□□□ -0.04
CHD3-214ENST00000572579 ACP7Q6ZNF0 438 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 C17orf107Q6ZR85 190 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 Q6ZSR3 168 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 CMTM4Q8IZR5 234 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 OR14K1Q8NGZ2 314 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 NPRL2Q8WTW4 380 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 ASB17Q8WXJ9 295 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 SLC22A13Q9Y226 551 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 V9GYS6 101 aa14.78□□□□□ -0.04
CHD3-214ENST00000572579 PQLC2LA1A4F0 135 aa14.77□□□□□ -0.05
CHD3-214ENST00000572579 NRASP01111 189 aa14.77□□□□□ -0.05
CHD3-214ENST00000572579 ATP6V1B1P15313 513 aa14.77□□□□□ -0.05
CHD3-214ENST00000572579 CEBPDP49716 269 aaPredicted RBP14.77□□□□□ -0.05
CHD3-214ENST00000572579 RIDAP52758 137 aaKnown RBP14.77□□□□□ -0.05
CHD3-214ENST00000572579 ESRRGP62508 458 aa14.77□□□□□ -0.05
CHD3-214ENST00000572579 GUCA2AQ02747 115 aa14.77□□□□□ -0.05
CHD3-214ENST00000572579 BNIP1Q12981 228 aa14.77□□□□□ -0.05
CHD3-214ENST00000572579 OCLNQ16625 522 aa14.77□□□□□ -0.05
CHD3-214ENST00000572579 PLCXD3Q63HM9 321 aa14.77□□□□□ -0.05
CHD3-214ENST00000572579 SLC35F2Q8IXU6 374 aa14.77□□□□□ -0.05
CHD3-214ENST00000572579 ELMOD2Q8IZ81 293 aa14.77□□□□□ -0.05
CHD3-214ENST00000572579 BATF2Q8N1L9 274 aa14.77□□□□□ -0.05
CHD3-214ENST00000572579 POC1AQ8NBT0 407 aa14.77□□□□□ -0.05
CHD3-214ENST00000572579 PPP1R35Q8TAP8 253 aa14.77□□□□□ -0.05
CHD3-214ENST00000572579 ZNF671Q8TAW3 534 aa14.77□□□□□ -0.05
CHD3-214ENST00000572579 DNAJC9Q8WXX5 260 aa14.77□□□□□ -0.05
CHD3-214ENST00000572579 IL4I1Q96RQ9 567 aa14.77□□□□□ -0.05
CHD3-214ENST00000572579 CNN2Q99439 309 aaKnown RBP14.77□□□□□ -0.05
CHD3-214ENST00000572579 DPAGT1Q9H3H5 408 aa14.77□□□□□ -0.05
CHD3-214ENST00000572579 C16orf95Q9H693 158 aa14.77□□□□□ -0.05
CHD3-214ENST00000572579 METTL8Q9H825 291 aaKnown RBP14.77□□□□□ -0.05
CHD3-214ENST00000572579 GPR173Q9NS66 373 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms