RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 RIN1Q13671 783 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 DOC2BQ14184 412 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 CDK5R1Q15078 307 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 MPPED2Q15777 294 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 CLVS2Q5SYC1 327 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 ZDHHC23Q8IYP9 409 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 BPIFB2Q8N4F0 458 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 PLPP7Q8NBV4 271 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 OR13C5Q8NGS8 318 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 TRMT10AQ8TBZ6 339 aaKnown RBP11.19□□□□□ -0.62
CCDC40-205ENST00000571028 HAVCR2Q8TDQ0 301 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 MICU1Q9BPX6 476 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 RTL8AQ9BWD3 113 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 C14orf119Q9NWQ9 140 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 MPC1Q9Y5U8 109 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 PKD1L1Q8TDX9 2849 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 FAM230AA0A1W2PPH8 454 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 hCG_1807616A0A1W2PRN6 198 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 ISPDA4D126 451 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 OGG1O15527 345 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 ZNF205O95201 554 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 CYB5R3P00387 301 aaPredicted RBP11.18□□□□□ -0.62
CCDC40-205ENST00000571028 RPSAP08865 295 aaKnown RBP11.18□□□□□ -0.62
CCDC40-205ENST00000571028 CELP19835 753 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 TAS2R43P59537 309 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 MZT1Q08AG7 82 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 IRF3Q14653 427 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 SPHARQ15513 63 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 CCDC58Q4VC31 144 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 ZNF826PQ6ZT77 177 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 PRSS48Q7RTY5 328 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 EGFL6Q8IUX8 553 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 SPERTQ8NA61 448 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 ZNF485Q8NCK3 441 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 OR5P3Q8WZ94 311 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 ADAT3Q96EY9 351 aaPredicted RBP11.18□□□□□ -0.62
CCDC40-205ENST00000571028 TMEM106BQ9NUM4 274 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 C1orf123Q9NWV4 160 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 DHDHQ9UQ10 334 aa11.18□□□□□ -0.62
CCDC40-205ENST00000571028 TRAV20A0A0B4J274 112 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 ANKRD61A6NGH8 418 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 ZNF732B4DXR9 585 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 SERPINA3P01011 423 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 ISG15P05161 165 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 OCM2P0CE71 109 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 OCMP0CE72 109 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-205ENST00000571028 IRF2P14316 349 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 ZNF12P17014 697 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 PMELP40967 661 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 CD200P41217 278 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 GABARAPL2P60520 117 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 GMFBP60983 142 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 HOXA4Q00056 320 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-205ENST00000571028 FAM201AQ5SY85 155 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 WDR86Q86TI4 376 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 C19orf18Q8NEA5 215 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 OR11L1Q8NGX0 322 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 HPSE2Q8WWQ2 592 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 RGP1Q92546 391 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-205ENST00000571028 GHSRQ92847 366 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 RPL3LQ92901 407 aaKnown RBP11.17□□□□□ -0.62
CCDC40-205ENST00000571028 ITPKCQ96DU7 683 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 SMIM19Q96E16 107 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 FGF23Q9GZV9 251 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-205ENST00000571028 FN3KRPQ9HA64 309 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 GCM1Q9NP62 436 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 LRRC42Q9Y546 428 aa11.17□□□□□ -0.62
CCDC40-205ENST00000571028 LOC105371242A0A075B767 164 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 A0A1B0GWJ7 208 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 CLDN25C9JDP6 229 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 C3orf80F5H4A9 247 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 RP2O75695 350 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 INMTO95050 263 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 MRPS11P82912 194 aaKnown RBP11.16□□□□□ -0.62
CCDC40-205ENST00000571028 CEACAM21Q3KPI0 293 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 ZBTB37Q5TC79 503 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 RNLSQ5VYX0 342 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 DMKNQ6E0U4 476 aaPredicted RBP11.16□□□□□ -0.62
CCDC40-205ENST00000571028 RBMS3Q6XE24 437 aaKnown RBP11.16□□□□□ -0.62
CCDC40-205ENST00000571028 CELF2-AS1Q8N7Q2 184 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 CCDC54Q8NEL0 328 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 OR1M1Q8NGA1 313 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 OR13C9Q8NGT0 318 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 CLDND2Q8NHS1 167 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 GPR148Q8TDV2 347 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 RAB1CQ92928 201 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 ORAI1Q96D31 301 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 TIMD4Q96H15 378 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 SLC6A7Q99884 636 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 YTHDF1Q9BYJ9 559 aaKnown RBP11.16□□□□□ -0.62
CCDC40-205ENST00000571028 ABCB9Q9NP78 766 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 SLC7A11Q9UPY5 501 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 ZNF281Q9Y2X9 895 aa11.16□□□□□ -0.62
CCDC40-205ENST00000571028 LSM2Q9Y333 95 aaKnown RBP11.16□□□□□ -0.62
CCDC40-205ENST00000571028 A0A1W2PPK0 400 aa11.15□□□□□ -0.62
CCDC40-205ENST00000571028 LRRC30A6NM36 301 aa11.15□□□□□ -0.62
CCDC40-205ENST00000571028 CDIPTO14735 213 aa11.15□□□□□ -0.62
CCDC40-205ENST00000571028 GATBO75879 557 aaKnown RBP11.15□□□□□ -0.62
CCDC40-205ENST00000571028 PLATP00750 562 aa11.15□□□□□ -0.62
CCDC40-205ENST00000571028 CD80P33681 288 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms