RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 SYT4Q9H2B2 425 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 ADGRL4Q9HBW9 690 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 B3GAT2Q9NPZ5 323 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 RPRD1BQ9NQG5 326 aaKnown RBP6.07□□□□□ -1.44
CNOT1-222ENST00000570139 PTTG2Q9NZH5 202 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 ENPP5Q9UJA9 477 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 LSM2Q9Y333 95 aaKnown RBP6.07□□□□□ -1.44
CNOT1-222ENST00000570139 FAM186AA6NE01 2351 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 MPDZO75970 2070 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 IGKV3D-15A0A087WSY6 115 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 IGLV1-36A0A0B4J1U3 117 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 TRGV5A0A0B4J1U4 118 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 A0A0J9YW62 118 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 FAM166BA8MTA8 275 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 TNFSF11O14788 317 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 CYTIPO60759 359 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 SULT1C4O75897 302 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 AQP8O94778 261 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 F10P00742 488 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 PTHP01270 115 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 CRYABP02511 175 aaKnown RBP6.06□□□□□ -1.44
CNOT1-222ENST00000570139 LIMS3P0CW19 117 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 LIMS4P0CW20 117 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 PGA4P0DJD7 388 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 PGA3P0DJD8 388 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 CD36P16671 472 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 SHC1P29353 583 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 GUCA1AP43080 201 aaPredicted RBP6.06□□□□□ -1.44
CNOT1-222ENST00000570139 MAP2K4P45985 399 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 RGS6P49758 472 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 ETV1P50549 477 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF133P52736 654 aaPredicted RBP6.06□□□□□ -1.44
CNOT1-222ENST00000570139 SUCLG1P53597 346 aaKnown RBP6.06□□□□□ -1.44
CNOT1-222ENST00000570139 BIDP55957 195 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 CLDN18P56856 261 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 SRSF6Q13247 344 aaKnown RBP6.06□□□□□ -1.44
CNOT1-222ENST00000570139 TPBGQ13641 420 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 SLC17A1Q14916 467 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 HIST3H3Q16695 136 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 CCDC58Q4VC31 144 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 TEX30Q5JUR7 227 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 C10orf128Q5T292 105 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 LINC01590Q5TEZ4 76 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF626Q68DY1 528 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF322Q6U7Q0 402 aaPredicted RBP6.06□□□□□ -1.44
CNOT1-222ENST00000570139 PLEKHG7Q6ZR37 379 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 Q6ZS92 163 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 CREB3L2Q70SY1 520 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 FCRLAQ7L513 359 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 SLC35F2Q8IXU6 374 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 Q8N1X5 172 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 KBTBD8Q8NFY9 601 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 OR10H4Q8NGA5 316 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 OR4F15Q8NGB8 312 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 OR9K2Q8NGE7 335 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 OR52B4Q8NGK2 314 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 OR10D3Q8NH80 312 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 TMEM45BQ96B21 275 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 ZMYND19Q96E35 227 aaPredicted RBP6.06□□□□□ -1.44
CNOT1-222ENST00000570139 YIPF6Q96EC8 236 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 TTYH2Q9BSA4 534 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 WACQ9BTA9 647 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 FUNDC2Q9BWH2 189 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 HCAR1Q9BXC0 346 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 MRPL13Q9BYD1 178 aaKnown RBP6.06□□□□□ -1.44
CNOT1-222ENST00000570139 HES7Q9BYE0 225 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 MED20Q9H944 212 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 WDR76Q9H967 626 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 SIAEQ9HAT2 523 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 GLRX2Q9NS18 164 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 NDUFB11Q9NX14 153 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 POU2F3Q9UKI9 436 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 B9D1Q9UPM9 204 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF175Q9Y473 711 aa6.06□□□□□ -1.44
CNOT1-222ENST00000570139 PKD1L2Q7Z442 2459 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 FAM230AA0A1W2PPH8 454 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 A0A1W2PPI3 338 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF724A8MTY0 619 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 H3BSA7 217 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 CHEK1O14757 476 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 SYNGR3O43761 229 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 SLC16A7O60669 478 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 SERPINA3P01011 423 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 GYPBP06028 91 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 HSMCR30P0CW71 290 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 CLUP10909 449 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 PSG1P11464 419 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 HLA-DOBP13765 273 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF823P16415 610 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 NPR2P20594 1047 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 CSNK1A1P48729 337 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 TUBA1BP68363 451 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 CNPY1Q3B7I2 92 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 GPR107Q5VW38 600 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 RPL22L1Q6P5R6 122 aaKnown RBP6.05□□□□□ -1.44
CNOT1-222ENST00000570139 DEGS2Q6QHC5 323 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 C19orf48Q6RUI8 117 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 LINC00299Q6ZSB3 139 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 TUBA1AQ71U36 451 aa6.05□□□□□ -1.44
CNOT1-222ENST00000570139 CDC20BQ86Y33 519 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms