RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 UFSP2Q9NUQ7 469 aa17.1■□□□□ 0.33
RNF40-210ENST00000566811 C1orf123Q9NWV4 160 aa17.1■□□□□ 0.33
RNF40-210ENST00000566811 WIPI2Q9Y4P8 454 aa17.1■□□□□ 0.33
RNF40-210ENST00000566811 CACNG2Q9Y698 323 aa17.1■□□□□ 0.33
RNF40-210ENST00000566811 ABCA2Q9BZC7 2435 aa17.1■□□□□ 0.33
RNF40-210ENST00000566811 hCG_1807616A0A1W2PRN6 198 aa17.09■□□□□ 0.33
RNF40-210ENST00000566811 TRIM64BA6NI03 449 aa17.09■□□□□ 0.33
RNF40-210ENST00000566811 H3BSH0 61 aa17.09■□□□□ 0.33
RNF40-210ENST00000566811 J3QT63 122 aa17.09■□□□□ 0.33
RNF40-210ENST00000566811 ATF1P18846 271 aa17.09■□□□□ 0.33
RNF40-210ENST00000566811 MDH2P40926 338 aaKnown RBP17.09■□□□□ 0.33
RNF40-210ENST00000566811 PPP3R1P63098 170 aa17.09■□□□□ 0.33
RNF40-210ENST00000566811 UBE2V2Q15819 145 aa17.09■□□□□ 0.33
RNF40-210ENST00000566811 WDR82Q6UXN9 313 aa17.09■□□□□ 0.33
RNF40-210ENST00000566811 ZNF420Q8TAQ5 688 aaPredicted RBP17.09■□□□□ 0.33
RNF40-210ENST00000566811 ZNF671Q8TAW3 534 aa17.09■□□□□ 0.33
RNF40-210ENST00000566811 PHYHIPQ92561 330 aa17.09■□□□□ 0.33
RNF40-210ENST00000566811 OPALINQ96PE5 141 aa17.09■□□□□ 0.33
RNF40-210ENST00000566811 NR1H4Q96RI1 486 aaPredicted RBP17.09■□□□□ 0.33
RNF40-210ENST00000566811 PKIBQ9C010 78 aa17.09■□□□□ 0.33
RNF40-210ENST00000566811 ZNF696Q9H7X3 374 aa17.09■□□□□ 0.33
RNF40-210ENST00000566811 A0A087WXM4 84 aa17.08■□□□□ 0.32
RNF40-210ENST00000566811 A0A096LNT2 108 aa17.08■□□□□ 0.32
RNF40-210ENST00000566811 PNMA8CA0A1B0GUJ8 204 aa17.08■□□□□ 0.32
RNF40-210ENST00000566811 ZNF879B4DU55 563 aa17.08■□□□□ 0.32
RNF40-210ENST00000566811 MAGEB3O15480 346 aa17.08■□□□□ 0.32
RNF40-210ENST00000566811 LMX1BO60663 402 aa17.08■□□□□ 0.32
RNF40-210ENST00000566811 IGHV2-70P01814 119 aa17.08■□□□□ 0.32
RNF40-210ENST00000566811 RAB3AP20336 220 aa17.08■□□□□ 0.32
RNF40-210ENST00000566811 PCMT1P22061 227 aa17.08■□□□□ 0.32
RNF40-210ENST00000566811 MPZP25189 248 aa17.08■□□□□ 0.32
RNF40-210ENST00000566811 AZGP1P25311 298 aaKnown RBP17.08■□□□□ 0.32
RNF40-210ENST00000566811 GABRA5P31644 462 aa17.08■□□□□ 0.32
RNF40-210ENST00000566811 MAP2K4P45985 399 aa17.08■□□□□ 0.32
RNF40-210ENST00000566811 ATP1B3P54709 279 aa17.08■□□□□ 0.32
RNF40-210ENST00000566811 RPS11P62280 158 aaKnown RBP eCLIP17.08■□□□□ 0.32
RNF40-210ENST00000566811 ZNF529Q6P280 563 aa17.08■□□□□ 0.32
RNF40-210ENST00000566811 SCCPDHQ8NBX0 429 aa17.08■□□□□ 0.32
RNF40-210ENST00000566811 C12orf43Q96C57 262 aaKnown RBP17.08■□□□□ 0.32
RNF40-210ENST00000566811 RAB39BQ96DA2 213 aa17.08■□□□□ 0.32
RNF40-210ENST00000566811 C18orf12Q96KH6 178 aa17.08■□□□□ 0.32
RNF40-210ENST00000566811 PPP1R3EQ9H7J1 279 aa17.08■□□□□ 0.32
RNF40-210ENST00000566811 PPIAL4EA0A075B759 164 aa17.07■□□□□ 0.32
RNF40-210ENST00000566811 A6NIN4 97 aa17.07■□□□□ 0.32
RNF40-210ENST00000566811 SRRM5B3KS81 715 aa17.07■□□□□ 0.32
RNF40-210ENST00000566811 RNF223E7ERA6 249 aa17.07■□□□□ 0.32
RNF40-210ENST00000566811 PPIAL4DF5H284 164 aa17.07■□□□□ 0.32
RNF40-210ENST00000566811 H7C1Q1 480 aa17.07■□□□□ 0.32
RNF40-210ENST00000566811 CDIPTO14735 213 aa17.07■□□□□ 0.32
RNF40-210ENST00000566811 GPX5O75715 221 aa17.07■□□□□ 0.32
RNF40-210ENST00000566811 ACAA1P09110 424 aaPredicted RBP17.07■□□□□ 0.32
RNF40-210ENST00000566811 PPIAL4FP0DN26 164 aa17.07■□□□□ 0.32
RNF40-210ENST00000566811 HAAOP46952 286 aa17.07■□□□□ 0.32
RNF40-210ENST00000566811 IL24Q13007 206 aa17.07■□□□□ 0.32
RNF40-210ENST00000566811 LIPKQ5VXJ0 399 aa17.07■□□□□ 0.32
RNF40-210ENST00000566811 OR13C9Q8NGT0 318 aa17.07■□□□□ 0.32
RNF40-210ENST00000566811 AQP3Q92482 292 aa17.07■□□□□ 0.32
RNF40-210ENST00000566811 FGF23Q9GZV9 251 aaPredicted RBP17.07■□□□□ 0.32
RNF40-210ENST00000566811 TREM2Q9NZC2 230 aa17.07■□□□□ 0.32
RNF40-210ENST00000566811 PPIAL4AQ9Y536 164 aa17.07■□□□□ 0.32
RNF40-210ENST00000566811 DNHD1Q96M86 4753 aa17.07■□□□□ 0.32
RNF40-210ENST00000566811 TRAV38-1A0A0B4J264 116 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 FAM230AA0A1W2PPH8 454 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 NDUFA2O43678 99 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 CYB5AP00167 134 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 CYB5R3P00387 301 aaPredicted RBP17.06■□□□□ 0.32
RNF40-210ENST00000566811 LHBP01229 141 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 GALP22466 123 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 PMELP40967 661 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 SOX2P48431 317 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 DOC2BQ14184 412 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 ARMCX4Q5H9R4 360 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 HAGHLQ6PII5 290 aaPredicted RBP17.06■□□□□ 0.32
RNF40-210ENST00000566811 LRRC28Q86X40 367 aaPredicted RBP17.06■□□□□ 0.32
RNF40-210ENST00000566811 PHC2Q8IXK0 858 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 C11orf53Q8IXP5 236 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 GCSAMQ8N6F7 178 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 TSPAN14Q8NG11 270 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 LRRC29Q8WV35 223 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 RPL3LQ92901 407 aaKnown RBP17.06■□□□□ 0.32
RNF40-210ENST00000566811 DERL3Q96Q80 235 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 OR14A2Q96R54 314 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 GAL3ST1Q99999 423 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 GSX1Q9H4S2 264 aaPredicted RBP17.06■□□□□ 0.32
RNF40-210ENST00000566811 RHOFQ9HBH0 211 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 NDUFB11Q9NX14 153 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 RASL12Q9NYN1 266 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 FOXJ3Q9UPW0 622 aa17.06■□□□□ 0.32
RNF40-210ENST00000566811 YLPM1P49750 1951 aaKnown RBP17.06■□□□□ 0.32
RNF40-210ENST00000566811 TRBV5-7A0A0A0MS05 114 aa17.05■□□□□ 0.32
RNF40-210ENST00000566811 IGKV1-9A0A0C4DH69 117 aa17.05■□□□□ 0.32
RNF40-210ENST00000566811 IGHV3-64DA0A0J9YX35 117 aa17.05■□□□□ 0.32
RNF40-210ENST00000566811 ISPDA4D126 451 aa17.05■□□□□ 0.32
RNF40-210ENST00000566811 LGALS8O00214 317 aa17.05■□□□□ 0.32
RNF40-210ENST00000566811 NOS1APO75052 506 aaPredicted RBP17.05■□□□□ 0.32
RNF40-210ENST00000566811 SC5DO75845 299 aa17.05■□□□□ 0.32
RNF40-210ENST00000566811 ALDOBP05062 364 aa17.05■□□□□ 0.32
RNF40-210ENST00000566811 HCKP08631 526 aa17.05■□□□□ 0.32
RNF40-210ENST00000566811 MUC1P15941 1255 aaPredicted RBP17.05■□□□□ 0.32
RNF40-210ENST00000566811 ZNF404Q494X3 552 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms