RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 TREM2Q9NZC2 230 aa9.7□□□□□ -0.86
KARS-207ENST00000566560 PPP1R3CQ9UQK1 317 aa9.7□□□□□ -0.86
KARS-207ENST00000566560 CACNG2Q9Y698 323 aa9.7□□□□□ -0.86
KARS-207ENST00000566560 CSMD2Q7Z408 3487 aa9.7□□□□□ -0.86
KARS-207ENST00000566560 TRBV5-7A0A0A0MS05 114 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 IGKV1-9A0A0C4DH69 117 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 LOC100289279A0A1B0GTE1 492 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 FAM230AA0A1W2PPH8 454 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 A0A1W2PPK0 400 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 hCG_1807616A0A1W2PRN6 198 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 PQLC2LA1A4F0 135 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 LRP5LA4QPB2 252 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 LYNX1G3V0Z9 82 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 GABRPO00591 440 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 RP2O75695 350 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 SC5DO75845 299 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 HCKP08631 526 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 LYNX1P0DP58 116 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 RAB3AP20336 220 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 PRKACBP22694 351 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 CRYBB2P43320 205 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 PDLIM4P50479 330 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 HNRNPA0Q13151 305 aaKnown RBP9.69□□□□□ -0.86
KARS-207ENST00000566560 MPPED2Q15777 294 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 ACSM3Q53FZ2 586 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 OR5A2Q8NGI9 324 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 OR51A2Q8NGJ7 313 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 OR11L1Q8NGX0 322 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 ZNF420Q8TAQ5 688 aaPredicted RBP9.69□□□□□ -0.86
KARS-207ENST00000566560 CCL17Q92583 94 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 ERGIC1Q969X5 290 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 ORAI1Q96D31 301 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 CHODLQ9H9P2 273 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 NEK6Q9HC98 313 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 GCM1Q9NP62 436 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 NOX4Q9NPH5 578 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 DLL4Q9NR61 685 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 TMEM106BQ9NUM4 274 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 ITGB1BP2Q9UKP3 347 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 SF3B6Q9Y3B4 125 aaKnown RBP9.69□□□□□ -0.86
KARS-207ENST00000566560 PDZD2O15018 2839 aa9.69□□□□□ -0.86
KARS-207ENST00000566560 TRAV8-7A0A075B6U6 113 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 LRRC30A6NM36 301 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 CLDN25C9JDP6 229 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 IRF2P14316 349 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 ZNF16P17020 682 aaPredicted RBP9.68□□□□□ -0.86
KARS-207ENST00000566560 JUNBP17275 347 aaPredicted RBP9.68□□□□□ -0.86
KARS-207ENST00000566560 TGFBR2P37173 567 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 HAAOP46952 286 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 FUT6P51993 359 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 FABP5Q01469 135 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 CLEC12BQ2HXU8 276 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 HSD17B12Q53GQ0 312 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 FAM27D1Q5T7N8 215 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 HAGHLQ6PII5 290 aaPredicted RBP9.68□□□□□ -0.86
KARS-207ENST00000566560 LHFPL2Q6ZUX7 228 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 CEACAM19Q7Z692 300 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 TGIF2LYQ8IUE0 185 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 KRTAP1-3Q8IUG1 177 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 DNAAF1Q8NEP3 725 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 Q8TCH9 128 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 FAM168AQ92567 244 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 RPL3LQ92901 407 aaKnown RBP9.68□□□□□ -0.86
KARS-207ENST00000566560 PIMREGQ9BSJ6 248 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 TLNRD1Q9H1K6 362 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 C1orf123Q9NWV4 160 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 DCAF16Q9NXF7 216 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 STUB1Q9UNE7 303 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 CSMD1Q96PZ7 3565 aa9.68□□□□□ -0.86
KARS-207ENST00000566560 IGKV1-27A0A075B6S5 117 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 CYSRT1A8MQ03 144 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 J3QT63 122 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 IFNL4K9M1U5 179 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 PIN1P1O15428 100 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 MAGEB3O15480 346 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 ARL6IP5O75915 188 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 ALX3O95076 343 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 CYB5R3P00387 301 aaPredicted RBP9.67□□□□□ -0.86
KARS-207ENST00000566560 PLATP00750 562 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 CD36P16671 472 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 IGFBP3P17936 291 aaPredicted RBP9.67□□□□□ -0.86
KARS-207ENST00000566560 COL8A2P25067 703 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 BDKRB2P30411 391 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 POU3F4P49335 361 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 RBP2P50120 134 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 ATP1B3P54709 279 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 MTCP1P56278 107 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 ZNF181Q2M3W8 571 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 DDI2Q5TDH0 399 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 SHEQ5VZ18 495 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 ZNF529Q6P280 563 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 WDR82Q6UXN9 313 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 TMEM91Q6ZNR0 172 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 ZNF826PQ6ZT77 177 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 ZNF573Q86YE8 665 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 C1orf87Q8N0U7 546 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 SCCPDHQ8NBX0 429 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 LRRC29Q8WV35 223 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 RFT1Q96AA3 541 aa9.67□□□□□ -0.86
KARS-207ENST00000566560 CPNE2Q96FN4 548 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms