RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 CHST5Q9GZS9 411 aa6.37□□□□□ -1.39
SMG1-210ENST00000565224 NELFAQ9H3P2 528 aa6.37□□□□□ -1.39
SMG1-210ENST00000565224 ELL3Q9HB65 397 aaPredicted RBP6.37□□□□□ -1.39
SMG1-210ENST00000565224 TAF9BQ9HBM6 251 aa6.37□□□□□ -1.39
SMG1-210ENST00000565224 ACKR4Q9NPB9 350 aa6.37□□□□□ -1.39
SMG1-210ENST00000565224 ZNF701Q9NV72 531 aaPredicted RBP6.37□□□□□ -1.39
SMG1-210ENST00000565224 RCC2Q9P258 522 aaKnown RBP6.37□□□□□ -1.39
SMG1-210ENST00000565224 C19orf25Q9UFG5 118 aaPredicted RBP6.37□□□□□ -1.39
SMG1-210ENST00000565224 RARRES3Q9UL19 164 aa6.37□□□□□ -1.39
SMG1-210ENST00000565224 FAM96BQ9Y3D0 163 aa6.37□□□□□ -1.39
SMG1-210ENST00000565224 TECTAO75443 2155 aa6.37□□□□□ -1.39
SMG1-210ENST00000565224 PHF3Q92576 2039 aaKnown RBP6.36□□□□□ -1.39
SMG1-210ENST00000565224 ADAMTS9Q9P2N4 1935 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 UNC13CQ8NB66 2214 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 RRP8O43159 456 aaKnown RBP6.36□□□□□ -1.39
SMG1-210ENST00000565224 DKK1O94907 266 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 CTSDP07339 412 aaPredicted RBP6.36□□□□□ -1.39
SMG1-210ENST00000565224 ZNF708P17019 499 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 RCC1P18754 421 aaPredicted RBP6.36□□□□□ -1.39
SMG1-210ENST00000565224 RFC3P40938 356 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 LPAR6P43657 344 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 ENDOGQ14249 297 aaKnown RBP6.36□□□□□ -1.39
SMG1-210ENST00000565224 C10orf128Q5T292 105 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 GALNTL5Q7Z4T8 443 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 CCDC54Q8NEL0 328 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 FNDC9Q8TBE3 224 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 DNASE2BQ8WZ79 361 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 SHDQ96IW2 340 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 ZFP57Q9NU63 452 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 PIGLQ9Y2B2 252 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 ADAMTS20P59510 1910 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 GPR179Q6PRD1 2367 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 ASPMQ8IZT6 3477 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 IGKV1D-8A0A087WSZ0 117 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 OR5H15A6NDH6 313 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 RNASEK-C17orf49H0YIS7 233 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 K7EPK0 472 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 TP53I11O14683 189 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 FARS2O95363 451 aaKnown RBP6.36□□□□□ -1.39
SMG1-210ENST00000565224 CST4P01036 141 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 HEXAP06865 529 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 SFTA3P0C7M3 94 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 NME2P22392 152 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 RPL12P30050 165 aaKnown RBP6.36□□□□□ -1.39
SMG1-210ENST00000565224 HOXA1P49639 335 aaPredicted RBP6.36□□□□□ -1.39
SMG1-210ENST00000565224 SULT1A2P50226 295 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 RAB13P51153 203 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 ZNF133P52736 654 aaPredicted RBP6.36□□□□□ -1.39
SMG1-210ENST00000565224 SMCO1Q147U7 214 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 PRAMEF20Q5VT98 475 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 TMEM268Q5VZI3 342 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 ZNF385CQ66K41 422 aaPredicted RBP6.36□□□□□ -1.39
SMG1-210ENST00000565224 Q6ZSR3 168 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 FOXL2NBQ6ZUU3 175 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 C6orf201Q7Z4U5 140 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 FOXRED2Q8IWF2 684 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 SULF2Q8IWU5 870 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 SGPP2Q8IWX5 399 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 FAM71E2Q8N5Q1 922 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 SEMA6DQ8NFY4 1073 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 HLA-CQ95604 372 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 TMEM54Q969K7 222 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 PIGTQ969N2 578 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 ZNF775Q96BV0 537 aaPredicted RBP6.36□□□□□ -1.39
SMG1-210ENST00000565224 C10orf35Q96D05 121 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 CPNE2Q96FN4 548 aaPredicted RBP6.36□□□□□ -1.39
SMG1-210ENST00000565224 ZNF2Q9BSG1 426 aaPredicted RBP6.36□□□□□ -1.39
SMG1-210ENST00000565224 MCTS1Q9ULC4 181 aaKnown RBP6.36□□□□□ -1.39
SMG1-210ENST00000565224 MRPS17Q9Y2R5 130 aaKnown RBP6.36□□□□□ -1.39
SMG1-210ENST00000565224 PCDHGA1Q9Y5H4 931 aa6.36□□□□□ -1.39
SMG1-210ENST00000565224 CHCHD2Q9Y6H1 151 aaPredicted RBP6.36□□□□□ -1.39
SMG1-210ENST00000565224 A0A087WZY1 265 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 DHRS7CA6NNS2 312 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 M0R135 149 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 DEDDO75618 318 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 ONECUT2O95948 504 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 IFNA21P01568 189 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 APOC1P02654 83 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 GAPDHP04406 335 aaKnown RBP6.35□□□□□ -1.39
SMG1-210ENST00000565224 SERPINA5P05154 406 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 GABRR1P24046 479 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 OTX1P32242 354 aaPredicted RBP6.35□□□□□ -1.39
SMG1-210ENST00000565224 HIST1H3AP68431 136 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 H3F3AP84243 136 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 SHBQ15464 509 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 PHYHD1Q5SRE7 291 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 HIST2H3PS2Q5TEC6 136 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 SHEQ5VZ18 495 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 OR2A2Q6IF42 318 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 BTNL8Q6UX41 500 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 HIST2H3AQ71DI3 136 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 DTX1Q86Y01 620 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 NABP1Q96AH0 204 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 ZNF799Q96GE5 643 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 Q96M66 194 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 PIGQQ9BRB3 760 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 PHF7Q9BWX1 381 aaPredicted RBP6.35□□□□□ -1.39
SMG1-210ENST00000565224 PARP11Q9NR21 331 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 PLEKHJ1Q9NW61 149 aa6.35□□□□□ -1.39
SMG1-210ENST00000565224 FBXL17Q9UF56 701 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms