RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 NANOS1Q8WY41 292 aaKnown RBP5.63□□□□□ -1.51
CLK3-212ENST00000563418 MYEOVQ96EZ4 313 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 PELI1Q96FA3 418 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 OR2A5Q96R48 311 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 GKN1Q9NS71 199 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 DSPPQ9NZW4 1301 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 TMEM238LA0A1B0GVL6 79 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 A6NJY4 79 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 ZNF891A8MT65 544 aaPredicted RBP5.63□□□□□ -1.51
CLK3-212ENST00000563418 VENTXO95231 258 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 GRB2P62993 217 aaKnown RBP5.63□□□□□ -1.51
CLK3-212ENST00000563418 AMDHD1Q96NU7 426 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 SLC2A8Q9NY64 477 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 PADI3Q9ULW8 664 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 NRXN3Q9Y4C0 1643 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 XRCC2O43543 280 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 PRSS56P0CW18 603 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 HIST1H1EP10412 219 aaKnown RBP5.62□□□□□ -1.51
CLK3-212ENST00000563418 F2RP25116 425 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 SRSF4Q08170 494 aaKnown RBP5.62□□□□□ -1.51
CLK3-212ENST00000563418 DOK3Q7L591 496 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 OR10G4Q8NGN3 311 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 GINS3Q9BRX5 216 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 NAA60Q9H7X0 242 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 CLDND1Q9NY35 253 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 NTNG1Q9Y2I2 539 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 SNRPCP09234 159 aaKnown RBP5.62□□□□□ -1.51
CLK3-212ENST00000563418 ANKRD34CP0C6C1 535 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 SLC25A1P53007 311 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 SLCO4C1Q6ZQN7 724 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 SPPL3Q8TCT6 385 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 LANCL2Q9NS86 450 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 SPANXCQ9NY87 97 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 OR51B2Q9Y5P1 312 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 FAM24AA6NFZ4 105 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 VSTM2BA6NLU5 285 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 TNFSF13O75888 250 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 LAIR2Q6ISS4 152 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 HMGN2P46Q86SG4 172 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 GPA33Q99795 319 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 VN1R3Q9BXE9 311 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 SLCO1C1Q9NYB5 712 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 A0A1B0GW64 132 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 ACTL6AO96019 429 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 NID1P14543 1247 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 PHLDA2Q53GA4 152 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 ASB5Q8WWX0 329 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 SAP30LQ9HAJ7 183 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 TAAR2Q9P1P5 351 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 ABI3Q9P2A4 366 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 R4GMQ9 66 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 C8AP07357 584 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 JMJD7P0C870 316 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 HLA-GP17693 338 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 VASPP50552 380 aaPredicted RBP5.62□□□□□ -1.51
CLK3-212ENST00000563418 ZNF160Q9HCG1 818 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 GABRQQ9UN88 632 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 PRRT4C9JH25 899 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 STC2O76061 302 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 CPMP14384 443 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 SYT9Q86SS6 491 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 FKRPQ9H9S5 495 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 MTCH1Q9NZJ7 389 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 ZNF646O15015 1829 aaPredicted RBP5.62□□□□□ -1.51
CLK3-212ENST00000563418 CDC14CA4D256 554 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 HCRTR1O43613 425 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 CA2P00918 260 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 CTSOP43234 321 aaPredicted RBP5.62□□□□□ -1.51
CLK3-212ENST00000563418 SELENOTP62341 195 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 NPSR1Q6W5P4 371 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 OR1L6Q8NGR2 347 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 RGP1Q92546 391 aaPredicted RBP5.62□□□□□ -1.51
CLK3-212ENST00000563418 ADAT3Q96EY9 351 aaPredicted RBP5.62□□□□□ -1.51
CLK3-212ENST00000563418 SOSTQ9BQB4 213 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 IFITM10A6NMD0 228 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 ZNF17P17021 662 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 CSN1S1P47710 185 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 GUCA2AQ02747 115 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 TMEM30AQ9NV96 361 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 JKAMPQ9P055 326 aa5.62□□□□□ -1.51
CLK3-212ENST00000563418 C11orf94C9JXX5 98 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 MEF2BQ02080 365 aaPredicted RBP5.61□□□□□ -1.51
CLK3-212ENST00000563418 TSEN54Q7Z6J9 526 aaKnown RBP5.61□□□□□ -1.51
CLK3-212ENST00000563418 STXBP6Q8NFX7 210 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 NEU1Q99519 415 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 PSENENQ9NZ42 101 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 SCN2AQ99250 2005 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 HSD17B6O14756 317 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 CD5P06127 495 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 ERGP11308 486 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 FMODQ06828 376 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 GABRA6Q16445 453 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 IGSF8Q969P0 613 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 GLRX2Q9NS18 164 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 SLC6A13Q9NSD5 602 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 B4GALT6Q9UBX8 382 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 NXT1Q9UKK6 140 aaKnown RBP5.61□□□□□ -1.51
CLK3-212ENST00000563418 RPS20P60866 119 aaKnown RBP5.61□□□□□ -1.51
CLK3-212ENST00000563418 VHLLQ6RSH7 139 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 ANAPC13Q9BS18 74 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms