RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 RYDENQ9NUL5 291 aaKnown RBP11.46□□□□□ -0.58
USB1-207ENST00000563149 PLEKHJ1Q9NW61 149 aa11.46□□□□□ -0.58
USB1-207ENST00000563149 GSKIPQ9P0R6 139 aa11.46□□□□□ -0.58
USB1-207ENST00000563149 DNAH14Q0VDD8 3507 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 UNC13CQ8NB66 2214 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 A0A1W2PQM1 296 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 PMS2P1A4D2B8 440 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 OR5H15A6NDH6 313 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 DEDDO75618 318 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 SFTPBP07988 381 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 FAHP16930 419 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 DTYMKP23919 212 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 RPL12P30050 165 aaKnown RBP11.45□□□□□ -0.58
USB1-207ENST00000563149 RFC3P40938 356 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 HOXA1P49639 335 aaPredicted RBP11.45□□□□□ -0.58
USB1-207ENST00000563149 CCL7P80098 99 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 SRSF3P84103 164 aaKnown RBP11.45□□□□□ -0.58
USB1-207ENST00000563149 FAM3AP98173 230 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 PCOLCEQ15113 449 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 RSPO1Q2MKA7 263 aaPredicted RBP11.45□□□□□ -0.58
USB1-207ENST00000563149 TMEM268Q5VZI3 342 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 BTNL8Q6UX41 500 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 SKA3Q8IX90 412 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 TMEM123Q8N131 208 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 BHLHE23Q8NDY6 225 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 NTNG2Q96CW9 530 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 ZNF2Q9BSG1 426 aaPredicted RBP11.45□□□□□ -0.58
USB1-207ENST00000563149 ZNF701Q9NV72 531 aaPredicted RBP11.45□□□□□ -0.58
USB1-207ENST00000563149 PRR13Q9NZ81 148 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 RCC2Q9P258 522 aaKnown RBP11.45□□□□□ -0.58
USB1-207ENST00000563149 ANXA10Q9UJ72 324 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 FOXD3Q9UJU5 478 aaPredicted RBP11.45□□□□□ -0.58
USB1-207ENST00000563149 KCNIP3Q9Y2W7 256 aa11.45□□□□□ -0.58
USB1-207ENST00000563149 SPAG17Q6Q759 2223 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 C5orf63A6NC05 138 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 RNASEK-C17orf49H0YIS7 233 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 K7EPK0 472 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 DNPH1O43598 174 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 KNG1P01042 644 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 CD5P06127 495 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 KLK2P20151 261 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 EPHA8P29322 1005 aaPredicted RBP11.44□□□□□ -0.58
USB1-207ENST00000563149 F2RL1P55085 397 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 MRPS34P82930 218 aaKnown RBP11.44□□□□□ -0.58
USB1-207ENST00000563149 CNN3Q15417 329 aaKnown RBP11.44□□□□□ -0.58
USB1-207ENST00000563149 EXT1Q16394 746 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 PHYHD1Q5SRE7 291 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 FAM27BQ5VT28 67 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 RPL7L1Q6DKI1 246 aaKnown RBP11.44□□□□□ -0.58
USB1-207ENST00000563149 RPUSD3Q6P087 351 aaKnown RBP11.44□□□□□ -0.58
USB1-207ENST00000563149 GUSBP11Q6P575 273 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 MAML2Q8IZL2 1156 aaPredicted RBP11.44□□□□□ -0.58
USB1-207ENST00000563149 FAM71E2Q8N5Q1 922 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 OR9K2Q8NGE7 335 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 NPRL2Q8WTW4 380 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 CCDC74BQ96LY2 380 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 PRRX2Q99811 253 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 HRH4Q9H3N8 390 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 ELL3Q9HB65 397 aaPredicted RBP11.44□□□□□ -0.58
USB1-207ENST00000563149 MCTS1Q9ULC4 181 aaKnown RBP11.44□□□□□ -0.58
USB1-207ENST00000563149 LRP3O75074 770 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 FBXO24O75426 580 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 MED6O75586 246 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 CD63P08962 238 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 FGF5P12034 268 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 MUC1P15941 1255 aaPredicted RBP11.44□□□□□ -0.58
USB1-207ENST00000563149 PRKACAP17612 351 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 PRAMEF20Q5VT98 475 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 LCN10Q6JVE6 187 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 TMEM88Q6PEY1 159 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 DHRS11Q6UWP2 260 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 ASCL4Q6XD76 172 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 C6orf201Q7Z4U5 140 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 TMEM200AQ86VY9 491 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 COMMD1Q8N668 190 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 LYPD6BQ8NI32 183 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 MAFIPQ8WZ33 124 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 PIGTQ969N2 578 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 ZNF385AQ96PM9 386 aaKnown RBP11.44□□□□□ -0.58
USB1-207ENST00000563149 SF3B5Q9BWJ5 86 aaKnown RBP11.44□□□□□ -0.58
USB1-207ENST00000563149 RBM24Q9BX46 236 aaKnown RBP11.44□□□□□ -0.58
USB1-207ENST00000563149 SAV1Q9H4B6 383 aaPredicted RBP11.44□□□□□ -0.58
USB1-207ENST00000563149 ACKR4Q9NPB9 350 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 NECAP2Q9NVZ3 263 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 PLEK2Q9NYT0 353 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 PADI1Q9ULC6 663 aa11.44□□□□□ -0.58
USB1-207ENST00000563149 FCGR3AP08637 254 aa11.43□□□□□ -0.58
USB1-207ENST00000563149 LIFP15018 202 aa11.43□□□□□ -0.58
USB1-207ENST00000563149 FCGR2CP31995 323 aa11.43□□□□□ -0.58
USB1-207ENST00000563149 RAB13P51153 203 aa11.43□□□□□ -0.58
USB1-207ENST00000563149 RAB35Q15286 201 aa11.43□□□□□ -0.58
USB1-207ENST00000563149 HMGN3Q15651 99 aa11.43□□□□□ -0.58
USB1-207ENST00000563149 GGNBP1Q5YKI7 109 aa11.43□□□□□ -0.58
USB1-207ENST00000563149 GALNTL5Q7Z4T8 443 aa11.43□□□□□ -0.58
USB1-207ENST00000563149 C20orf196Q8IYI0 205 aa11.43□□□□□ -0.58
USB1-207ENST00000563149 LRTM2Q8N967 370 aa11.43□□□□□ -0.58
USB1-207ENST00000563149 UBAC2Q8NBM4 344 aa11.43□□□□□ -0.58
USB1-207ENST00000563149 M1APQ8TC57 530 aa11.43□□□□□ -0.58
USB1-207ENST00000563149 SGK3Q96BR1 496 aa11.43□□□□□ -0.58
USB1-207ENST00000563149 ZNF775Q96BV0 537 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms