RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 PIK3IP1Q96FE7 263 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 LRRC46Q96FV0 321 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 SLC25A44Q96H78 314 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 NARS2Q96I59 477 aaKnown RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 ADAD1Q96M93 576 aaKnown RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 C1orf147Q96MC9 270 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 ZNF75AQ96N20 296 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 AQP10Q96PS8 301 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 PHB2Q99623 299 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 SLC6A7Q99884 636 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 UQCC2Q9BRT2 126 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ABHD6Q9BV23 337 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 LRRC61Q9BV99 259 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ZNF471Q9BX82 626 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 ULBP3Q9BZM4 244 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 RTN4RQ9BZR6 473 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 NMES1Q9C002 83 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 CHST6Q9GZX3 395 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 RAB33BQ9H082 229 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 CST11Q9H112 138 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ATG5Q9H1Y0 275 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 MTIF3Q9H2K0 278 aaKnown RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 TCEAL2Q9H3H9 227 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 GAREM1Q9H706 876 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 MOB1AQ9H8S9 216 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 RNF122Q9H9V4 155 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 FN3KRPQ9HA64 309 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ELOVL3Q9HB03 270 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 CHMP1AQ9HD42 196 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 TMEM138Q9NPI0 162 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.15□□□□□ -2.07
SPG11-223ENST00000560858 ZC4H2Q9NQZ6 224 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 MMP26Q9NRE1 261 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 HRASLS2Q9NWW9 162 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 FAM206AQ9NX38 181 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 TAS2R3Q9NYW6 316 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 COMMD9Q9P000 198 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 MBD2Q9UBB5 411 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 GRHPRQ9UBQ7 328 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 CKLFQ9UBR5 152 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 SHPKQ9UHJ6 478 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ZNF230Q9UIE0 474 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 FBXO4Q9UKT5 387 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 MMP17Q9ULZ9 603 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 HHLA2Q9UM44 414 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 B9D1Q9UPM9 204 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 NOP16Q9Y3C1 178 aaKnown RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 OR10H1Q9Y4A9 318 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 TMEM184BQ9Y519 407 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 MRPS18BQ9Y676 258 aaKnown RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 TNRC6AQ8NDV7 1962 aaKnown RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 COL27A1Q8IZC6 1860 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 TMED7-TICAM2A0A0A6YYA0 188 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 A0A0A6YYD4 124 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 IGKV1D-43A0A0B4J1Z2 117 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 LOC101059948A0A1B0GTJ6 334 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 PQLC2LA1A4F0 135 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 TMEM218A2RU14 115 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 METTL21EPA6NDL7 271 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 ANKUB1A6NFN9 424 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 A6NIZ1 184 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 ZNF98A6NK75 572 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 SHISA7A6NL88 538 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 FOXI3A8MTJ6 420 aaPredicted RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 A8MVM7 634 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 C17orf105B2RV13 164 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 TMEM150CB9EJG8 249 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 FAM157AC9JC47 383 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 ZNF878C9JN71 531 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 C11orf98E9PRG8 122 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 PRAMEF26H0Y7S4 382 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 GPR31O00270 319 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 MFNGO00587 321 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 PLPP3O14495 311 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 XKRYO14609 159 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 CCSO14618 274 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 HCRTR2O43614 444 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 OR2T1O43869 369 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 SSX5O60225 188 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 FADS1O60427 444 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 LMX1BO60663 402 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 SLC16A7O60669 478 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 RAD1O60671 282 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 ZNF217O75362 1048 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 CA11O75493 328 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 AHSA1O95433 338 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 SFT2D2O95562 160 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 SEMA4FO95754 770 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 IGLV3-1P01715 115 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 APOC3P02656 99 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 TTRP02766 147 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 GAPDHP04406 335 aaKnown RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 FCER2P06734 321 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 CA3P07451 260 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 PRSS2P07478 247 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 DCNP07585 359 aaKnown RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 SPARCP09486 303 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 FAM157CP0CG43 387 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 PET100P0DJ07 73 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 CD79AP11912 226 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms