RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 SLC25A46Q96AG3 418 aa11.81□□□□□ -0.52
PKNOX1-209ENST00000560448 RAB39BQ96DA2 213 aa11.81□□□□□ -0.52
PKNOX1-209ENST00000560448 ITPKCQ96DU7 683 aa11.81□□□□□ -0.52
PKNOX1-209ENST00000560448 PGLYRP3Q96LB9 341 aa11.81□□□□□ -0.52
PKNOX1-209ENST00000560448 WDR12Q9GZL7 423 aaKnown RBP11.81□□□□□ -0.52
PKNOX1-209ENST00000560448 PLEKHA1Q9HB21 404 aa11.81□□□□□ -0.52
PKNOX1-209ENST00000560448 HMG20AQ9NP66 347 aa11.81□□□□□ -0.52
PKNOX1-209ENST00000560448 PALMDQ9NP74 551 aa11.81□□□□□ -0.52
PKNOX1-209ENST00000560448 GSTK1Q9Y2Q3 226 aa11.81□□□□□ -0.52
PKNOX1-209ENST00000560448 NPTNQ9Y639 398 aa11.81□□□□□ -0.52
PKNOX1-209ENST00000560448 MED13LQ71F56 2210 aa11.81□□□□□ -0.52
PKNOX1-209ENST00000560448 VPS13CQ709C8 3753 aa11.81□□□□□ -0.52
PKNOX1-209ENST00000560448 F8P00451 2351 aa11.81□□□□□ -0.52
PKNOX1-209ENST00000560448 H0YL77 283 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 J3QRK9 145 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 SC5DO75845 299 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 RGS9O75916 674 aaPredicted RBP11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 SDC2P34741 201 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 CFHR2P36980 270 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 RORCP51449 518 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 PRDX4Q13162 271 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 ALKBH1Q13686 389 aaKnown RBP11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 TRAM1Q15629 374 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 KCNJ8Q15842 424 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 TMEM249Q2WGJ8 235 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 FAM76BQ5HYJ3 339 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 CLVS2Q5SYC1 327 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 TMEM42Q69YG0 159 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 CIARTQ8N365 385 aaPredicted RBP11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 SPICQ8N5J4 248 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 OR5A2Q8NGI9 324 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 OR14K1Q8NGZ2 314 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 FAM71F1Q96KD3 344 aaPredicted RBP11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 COMMD4Q9H0A8 199 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 SNTG1Q9NSN8 517 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 PIGLQ9Y2B2 252 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 RHBDD3Q9Y3P4 386 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 WIPI2Q9Y4P8 454 aa11.8□□□□□ -0.52
PKNOX1-209ENST00000560448 DYSFO75923 2080 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 A0A1B0GTI1 187 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 SHISA3A0PJX4 238 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 LYNX1G3V0Z9 82 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 TMEM178BH3BS89 294 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 GATBO75879 557 aaKnown RBP11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 SERPINA3P01011 423 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 LYNX1P0DP58 116 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 PRSS12P56730 875 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 BTG1P62324 171 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 INSL4Q14641 139 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 CDK5R1Q15078 307 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 CEACAM21Q3KPI0 293 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 RPL22L1Q6P5R6 122 aaKnown RBP11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 PP6455Q8WZ26 134 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 OR5P3Q8WZ94 311 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 C1orf159Q96HA4 380 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 TLNRD1Q9H1K6 362 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 OCEL1Q9H607 264 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 FRRS1LQ9P0K9 344 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 HHLA2Q9UM44 414 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 PEX16Q9Y5Y5 336 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 CELSR1Q9NYQ6 3014 aa11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 ZNF469Q96JG9 3925 aaPredicted RBP11.79□□□□□ -0.52
PKNOX1-209ENST00000560448 IGHV4-61A0A0C4DH41 118 aa11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 P2RY10O00398 339 aa11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 SMAD7O15105 426 aaKnown RBP11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 CD5LO43866 347 aa11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 NRASP01111 189 aa11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 MDH2P40926 338 aaKnown RBP11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 ETV6P41212 452 aa11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 GNG3P63215 75 aa11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 MOGAT3Q86VF5 341 aa11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 PRSS35Q8N3Z0 413 aa11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 OR1M1Q8NGA1 313 aa11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 PIGCQ92535 297 aa11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 GHSRQ92847 366 aa11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 SMIM19Q96E16 107 aa11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 C6orf62Q9GZU0 229 aaPredicted RBP11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 NEK6Q9HC98 313 aa11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 SMURF1Q9HCE7 757 aa11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 RNF7Q9UBF6 113 aa11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 FLNAP21333 2647 aaKnown RBP11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 HIVEP1P15822 2718 aa11.78□□□□□ -0.52
PKNOX1-209ENST00000560448 LOC100289279A0A1B0GTE1 492 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 LOC107986453A0A1B0GWG9 222 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 LRP5LA4QPB2 252 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 A6NLC8 198 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 OR4C45A6NMZ5 311 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 ZNF850A8MQ14 1090 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 CTDSP2O14595 271 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 IGHV2-70P01814 119 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 PSMB10P40306 273 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 RPS11P62280 158 aaKnown RBP eCLIP11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 MXD1Q05195 221 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 ZNF154Q13106 437 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 HNRNPA0Q13151 305 aaKnown RBP11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 CYB5R2Q6BCY4 276 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 CLEC9AQ6UXN8 241 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 CCDC190Q86UF4 302 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 LRRC28Q86X40 367 aaPredicted RBP11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 MS4A15Q8N5U1 240 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms