RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 THEM6Q8WUY1 208 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 KCTD12Q96CX2 325 aaKnown RBP11.4□□□□□ -0.58
SMAD3-214ENST00000560402 CMBLQ96DG6 245 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 PELI1Q96FA3 418 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 TSSK2Q96PF2 358 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 OR2V2Q96R30 315 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 SLC30A2Q9BRI3 323 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 HDHD2Q9H0R4 259 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 SLITRK2Q9H156 845 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 POFUT1Q9H488 388 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 DCAF16Q9NXF7 216 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 ASH2LQ9UBL3 628 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 KCNG2Q9UJ96 466 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 POLR1DQ9Y2S0 133 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 STARD10Q9Y365 291 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 INSIG2Q9Y5U4 225 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 DOCK11Q5JSL3 2073 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 MGAM2Q2M2H8 2515 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 IGLV1-36A0A0B4J1U3 117 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 TVP23AA6NH52 213 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 TMEM178BH3BS89 294 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 J3QRK9 145 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 FSTL3O95633 263 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 EGR1P18146 543 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 ETV6P41212 452 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 DEFA1P59665 94 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 DEFA3P59666 94 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 ZMYND11Q15326 602 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 KCNMB1Q16558 191 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 ACSM3Q53FZ2 586 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 YIF1BQ5BJH7 314 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 SSX6Q7RTT6 188 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 MFSD4AQ8N468 514 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 OR1F12Q8NHA8 337 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 C22orf15Q8WYQ4 148 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 GHSRQ92847 366 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 APOBEC3DQ96AK3 386 aaPredicted RBP11.39□□□□□ -0.59
SMAD3-214ENST00000560402 WDFY2Q96P53 400 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 ZNF747Q9BV97 191 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 MROQ9BYG7 248 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 TTTY10Q9BZA0 68 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 ACOXLQ9NUZ1 547 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 COPS3Q9UNS2 423 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 ZNF281Q9Y2X9 895 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 PPIAL4AQ9Y536 164 aa11.39□□□□□ -0.59
SMAD3-214ENST00000560402 DNAJC9-AS1A6NH13 148 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 TMEM212A6NML5 194 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 CEACAM18A8MTB9 384 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 ZNF593O00488 134 aaPredicted RBP11.38□□□□□ -0.59
SMAD3-214ENST00000560402 ZNF254O75437 659 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 SELEP16581 610 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 ALOX5APP20292 161 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 PRTN3P24158 256 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 SRP9P49458 86 aaKnown RBP11.38□□□□□ -0.59
SMAD3-214ENST00000560402 RIDAP52758 137 aaKnown RBP11.38□□□□□ -0.59
SMAD3-214ENST00000560402 HCCSP53701 268 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 ALKBH1Q13686 389 aaKnown RBP11.38□□□□□ -0.59
SMAD3-214ENST00000560402 CCDC92Q53HC0 331 aaPredicted RBP11.38□□□□□ -0.59
SMAD3-214ENST00000560402 TEX30Q5JUR7 227 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 SHISA2Q6UWI4 295 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 BTNL3Q6UXE8 466 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 DPY19L4Q7Z388 723 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 KRT77Q7Z794 578 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 C1orf87Q8N0U7 546 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 SIGLECL1Q8N7X8 197 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 OR8G5Q8NG78 346 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 OR5AK2Q8NH90 309 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 MEGF10Q96KG7 1140 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 OR8B4Q96RC9 309 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 CCDC32Q9BV29 185 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 SSBP3Q9BWW4 388 aaPredicted RBP11.38□□□□□ -0.59
SMAD3-214ENST00000560402 GCM1Q9NP62 436 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 MMP26Q9NRE1 261 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 MIOXQ9UGB7 285 aa11.38□□□□□ -0.59
SMAD3-214ENST00000560402 COA3Q9Y2R0 106 aaPredicted RBP11.38□□□□□ -0.59
SMAD3-214ENST00000560402 TRAV1-2A0A0B4J238 106 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 LRRC30A6NM36 301 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 IQCF6A8MYZ5 107 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 E9PI62 339 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 TRAPPC2LH3BP13 241 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 CLDN34H7C241 214 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 DCTN6O00399 190 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 RPS2P15880 293 aaKnown RBP11.37□□□□□ -0.59
SMAD3-214ENST00000560402 SEC61A1P61619 476 aaKnown RBP11.37□□□□□ -0.59
SMAD3-214ENST00000560402 HIST1H3AP68431 136 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 EIF2B1Q14232 305 aaKnown RBP11.37□□□□□ -0.59
SMAD3-214ENST00000560402 TRIM16LQ309B1 348 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 HSD17B12Q53GQ0 312 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 KLF17Q5JT82 389 aaPredicted RBP11.37□□□□□ -0.59
SMAD3-214ENST00000560402 HIST2H3PS2Q5TEC6 136 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 DEGS2Q6QHC5 323 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 LRRN1Q6UXK5 716 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 C9orf139Q6ZV77 190 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 HIST2H3AQ71DI3 136 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 ZNF679Q8IYX0 411 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 OR5AS1Q8N127 324 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 ZNF676Q8N7Q3 588 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 GJC3Q8NFK1 279 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 OR13G1Q8NGZ3 307 aa11.37□□□□□ -0.59
SMAD3-214ENST00000560402 ZNRF4Q8WWF5 429 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms