RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 TOPBP1Q92547 1522 aa6.37□□□□□ -1.39
CASC4-208ENST00000559151 SNAPC4Q5SXM2 1469 aa6.37□□□□□ -1.39
CASC4-208ENST00000559151 JCADQ9P266 1359 aa6.37□□□□□ -1.39
CASC4-208ENST00000559151 FAM25EA8MYX2 175 aa6.37□□□□□ -1.39
CASC4-208ENST00000559151 RPN2P04844 631 aa6.37□□□□□ -1.39
CASC4-208ENST00000559151 IL4P05112 153 aa6.37□□□□□ -1.39
CASC4-208ENST00000559151 MMP7P09237 267 aaPredicted RBP6.37□□□□□ -1.39
CASC4-208ENST00000559151 LIPCP11150 499 aa6.37□□□□□ -1.39
CASC4-208ENST00000559151 PMELP40967 661 aa6.37□□□□□ -1.39
CASC4-208ENST00000559151 ZNF101Q8IZC7 436 aa6.37□□□□□ -1.39
CASC4-208ENST00000559151 TRIML2Q8N7C3 387 aa6.37□□□□□ -1.39
CASC4-208ENST00000559151 LRRC20Q8TCA0 184 aa6.37□□□□□ -1.39
CASC4-208ENST00000559151 GLT1D1Q96MS3 346 aa6.37□□□□□ -1.39
CASC4-208ENST00000559151 ZNF229Q9UJW7 825 aa6.37□□□□□ -1.39
CASC4-208ENST00000559151 C2orf16Q68DN1 1984 aa6.37□□□□□ -1.39
CASC4-208ENST00000559151 IGHV6-1A0A0B4J1U7 121 aa6.36□□□□□ -1.39
CASC4-208ENST00000559151 FAM240AA0A1B0GVK7 77 aa6.36□□□□□ -1.39
CASC4-208ENST00000559151 POLR1CO15160 346 aaPredicted RBP6.36□□□□□ -1.39
CASC4-208ENST00000559151 RRP8O43159 456 aaKnown RBP6.36□□□□□ -1.39
CASC4-208ENST00000559151 SC5DO75845 299 aa6.36□□□□□ -1.39
CASC4-208ENST00000559151 OSR2Q8N2R0 312 aa6.36□□□□□ -1.39
CASC4-208ENST00000559151 ZFAND1Q8TCF1 268 aa6.36□□□□□ -1.39
CASC4-208ENST00000559151 SFXN5Q8TD22 340 aa6.36□□□□□ -1.39
CASC4-208ENST00000559151 SNF8Q96H20 258 aa6.36□□□□□ -1.39
CASC4-208ENST00000559151 LINC00477Q96M19 166 aa6.36□□□□□ -1.39
CASC4-208ENST00000559151 SYT4Q9H2B2 425 aa6.36□□□□□ -1.39
CASC4-208ENST00000559151 VCX3AQ9NNX9 186 aa6.36□□□□□ -1.39
CASC4-208ENST00000559151 BGNP21810 368 aa6.35□□□□□ -1.39
CASC4-208ENST00000559151 MAD2L1BPQ15013 274 aaPredicted RBP6.35□□□□□ -1.39
CASC4-208ENST00000559151 VAMP3Q15836 100 aa6.35□□□□□ -1.39
CASC4-208ENST00000559151 FBXO48Q5FWF7 155 aa6.35□□□□□ -1.39
CASC4-208ENST00000559151 KHDRBS2Q5VWX1 349 aaKnown RBP6.35□□□□□ -1.39
CASC4-208ENST00000559151 UNQ9165/PRO28630Q6UXU0 137 aa6.35□□□□□ -1.39
CASC4-208ENST00000559151 ZNF615Q8N8J6 731 aa6.35□□□□□ -1.39
CASC4-208ENST00000559151 MARVELD1Q9BSK0 173 aa6.35□□□□□ -1.39
CASC4-208ENST00000559151 BEX2Q9BXY8 128 aa6.35□□□□□ -1.39
CASC4-208ENST00000559151 IGHV1-3A0A0C4DH29 117 aa6.34□□□□□ -1.39
CASC4-208ENST00000559151 IL3RAP26951 378 aa6.34□□□□□ -1.39
CASC4-208ENST00000559151 ERFP50548 548 aa6.34□□□□□ -1.39
CASC4-208ENST00000559151 ZNF616Q08AN1 781 aa6.34□□□□□ -1.39
CASC4-208ENST00000559151 HHATQ5VTY9 493 aa6.34□□□□□ -1.39
CASC4-208ENST00000559151 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.34□□□□□ -1.39
CASC4-208ENST00000559151 TAS2R5Q9NYW4 299 aa6.34□□□□□ -1.39
CASC4-208ENST00000559151 YEATS2Q9ULM3 1422 aa6.33□□□□□ -1.4
CASC4-208ENST00000559151 TRAV40A0A0B4J280 105 aa6.33□□□□□ -1.4
CASC4-208ENST00000559151 E7EWF7 191 aa6.33□□□□□ -1.4
CASC4-208ENST00000559151 M0R1B8 84 aa6.33□□□□□ -1.4
CASC4-208ENST00000559151 GATCO43716 136 aaKnown RBP6.33□□□□□ -1.4
CASC4-208ENST00000559151 PSMB5P28074 263 aa6.33□□□□□ -1.4
CASC4-208ENST00000559151 PPP1CAP62136 330 aa6.33□□□□□ -1.4
CASC4-208ENST00000559151 SETD3Q86TU7 594 aaPredicted RBP6.33□□□□□ -1.4
CASC4-208ENST00000559151 CA13Q8N1Q1 262 aa6.33□□□□□ -1.4
CASC4-208ENST00000559151 RTN4IP1Q8WWV3 396 aaPredicted RBP6.33□□□□□ -1.4
CASC4-208ENST00000559151 CDKL2Q92772 493 aa6.33□□□□□ -1.4
CASC4-208ENST00000559151 COA1Q9GZY4 146 aa6.33□□□□□ -1.4
CASC4-208ENST00000559151 RAB1BQ9H0U4 201 aa6.33□□□□□ -1.4
CASC4-208ENST00000559151 DDIT4Q9NX09 232 aa6.33□□□□□ -1.4
CASC4-208ENST00000559151 RAB23Q9ULC3 237 aa6.33□□□□□ -1.4
CASC4-208ENST00000559151 TFR2Q9UP52 801 aa6.33□□□□□ -1.4
CASC4-208ENST00000559151 ORC6Q9Y5N6 252 aa6.33□□□□□ -1.4
CASC4-208ENST00000559151 WIF1Q9Y5W5 379 aa6.33□□□□□ -1.4
CASC4-208ENST00000559151 S4R3C0 116 aa6.33□□□□□ -1.4
CASC4-208ENST00000559151 MAPKBP1O60336 1514 aa6.32□□□□□ -1.4
CASC4-208ENST00000559151 LOC100506127A0A0U1RQW1 187 aa6.32□□□□□ -1.4
CASC4-208ENST00000559151 CENPBD1B2RD01 187 aa6.32□□□□□ -1.4
CASC4-208ENST00000559151 RCBTB2O95199 551 aa6.32□□□□□ -1.4
CASC4-208ENST00000559151 PRSS3P35030 304 aa6.32□□□□□ -1.4
CASC4-208ENST00000559151 Q3ZCU0 254 aa6.32□□□□□ -1.4
CASC4-208ENST00000559151 LIN9Q5TKA1 542 aa6.32□□□□□ -1.4
CASC4-208ENST00000559151 SLC25A29Q8N8R3 303 aa6.32□□□□□ -1.4
CASC4-208ENST00000559151 SPANXA2-OT1Q8N9U9 137 aa6.32□□□□□ -1.4
CASC4-208ENST00000559151 C19orf60Q96EN9 201 aa6.32□□□□□ -1.4
CASC4-208ENST00000559151 ZSCAN16Q9H4T2 348 aaPredicted RBP6.32□□□□□ -1.4
CASC4-208ENST00000559151 ENPP4Q9Y6X5 453 aa6.32□□□□□ -1.4
CASC4-208ENST00000559151 PRDM2Q13029 1718 aa6.32□□□□□ -1.4
CASC4-208ENST00000559151 PPRC1Q5VV67 1664 aaKnown RBP6.31□□□□□ -1.4
CASC4-208ENST00000559151 IGLV3-12A0A075B6K2 115 aa6.31□□□□□ -1.4
CASC4-208ENST00000559151 RAB19A4D1S5 217 aa6.31□□□□□ -1.4
CASC4-208ENST00000559151 NDUFS5O43920 106 aa6.31□□□□□ -1.4
CASC4-208ENST00000559151 P2RY2P41231 377 aa6.31□□□□□ -1.4
CASC4-208ENST00000559151 RGS6P49758 472 aa6.31□□□□□ -1.4
CASC4-208ENST00000559151 TAS2R43P59537 309 aa6.31□□□□□ -1.4
CASC4-208ENST00000559151 TNNC1P63316 161 aa6.31□□□□□ -1.4
CASC4-208ENST00000559151 IL5RAQ01344 420 aa6.31□□□□□ -1.4
CASC4-208ENST00000559151 SHHQ15465 462 aa6.31□□□□□ -1.4
CASC4-208ENST00000559151 LUZP6Q538Z0 58 aa6.31□□□□□ -1.4
CASC4-208ENST00000559151 TTC32Q5I0X7 151 aa6.31□□□□□ -1.4
CASC4-208ENST00000559151 IGFL3Q6UXB1 125 aa6.31□□□□□ -1.4
CASC4-208ENST00000559151 RBM45Q8IUH3 476 aaKnown RBP6.31□□□□□ -1.4
CASC4-208ENST00000559151 ST13P4Q8IZP2 240 aaPredicted RBP6.31□□□□□ -1.4
CASC4-208ENST00000559151 OR2Z1Q8NG97 314 aa6.31□□□□□ -1.4
CASC4-208ENST00000559151 CEP170Q5SW79 1584 aa6.31□□□□□ -1.4
CASC4-208ENST00000559151 BTNL10A8MVZ5 291 aa6.3□□□□□ -1.4
CASC4-208ENST00000559151 IGKV1D-16P01601 117 aa6.3□□□□□ -1.4
CASC4-208ENST00000559151 GPR4P46093 362 aa6.3□□□□□ -1.4
CASC4-208ENST00000559151 GRB2P62993 217 aaKnown RBP6.3□□□□□ -1.4
CASC4-208ENST00000559151 ELF3P78545 371 aaPredicted RBP6.3□□□□□ -1.4
CASC4-208ENST00000559151 LAMTOR4Q0VGL1 99 aa6.3□□□□□ -1.4
CASC4-208ENST00000559151 CDNFQ49AH0 187 aa6.3□□□□□ -1.4
CASC4-208ENST00000559151 FAM222AQ5U5X8 452 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms