RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 CLVS1Q8IUQ0 354 aaPredicted RBP5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 JAGN1Q8N5M9 183 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 NKAIN3Q8N8D7 197 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 PNLDC1Q8NA58 520 aaKnown RBP5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 OR51A2Q8NGJ7 313 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 IGFBPL1Q8WX77 278 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 RDH5Q92781 318 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 RPL3LQ92901 407 aaKnown RBP5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 NINJ1Q92982 152 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 ERGIC1Q969X5 290 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 RFT1Q96AA3 541 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 S100A13Q99584 98 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 MYOZ1Q9NP98 299 aaPredicted RBP5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 DLL4Q9NR61 685 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 ZNF701Q9NV72 531 aaPredicted RBP5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 C1orf123Q9NWV4 160 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 PPP1R3CQ9UQK1 317 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 USF3Q68DE3 2245 aa5.59□□□□□ -1.52
CHRNA3-204ENST00000559002 RAI1Q7Z5J4 1906 aaPredicted RBP5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 TEX15Q9BXT5 2789 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 TRAV1-2A0A0B4J238 106 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 LOC100289279A0A1B0GTE1 492 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 TRIM64BA6NI03 449 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 J3QT63 122 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 CDIPTO14735 213 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 SSX4O60224 188 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 NDUFS7O75251 213 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 LY6HO94772 140 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 GABARAPO95166 117 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 PTBP3O95758 552 aaKnown RBP5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 F12P00748 615 aaPredicted RBP5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 IGHV4-39P01824 125 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 ALDOBP05062 364 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 ZNF93P35789 620 aaPredicted RBP5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 MTNR1BP49286 362 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 PSMD7P51665 324 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 MRPS11P82912 194 aaKnown RBP5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 ZNF154Q13106 437 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 BLMHQ13867 455 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 KISS1Q15726 138 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 MPPED2Q15777 294 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 SPRNQ5BIV9 151 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 ZNF529Q6P280 563 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 WDR86Q86TI4 376 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 ANKRD13BQ86YJ7 626 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 MKXQ8IYA7 352 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 C1orf87Q8N0U7 546 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 BOLLQ8N9W6 283 aaKnown RBP5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 SCCPDHQ8NBX0 429 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 OR52N4Q8NGI2 321 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 OR5D18Q8NGL1 313 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 ZNF420Q8TAQ5 688 aaPredicted RBP5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 ZNF671Q8TAW3 534 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 Q8TCH9 128 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 RAB2BQ8WUD1 216 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 TNFAIP8L1Q8WVP5 186 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 AQP3Q92482 292 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 CCL17Q92583 94 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 FOXRED1Q96CU9 486 aaPredicted RBP5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 MBD6Q96DN6 1003 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 SPACA5Q96QH8 159 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 CENPOQ9BU64 300 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 GSX2Q9BZM3 304 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 PKIBQ9C010 78 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 FAM192AQ9GZU8 254 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 FGF23Q9GZV9 251 aaPredicted RBP5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 TLNRD1Q9H1K6 362 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 PPIL3Q9H2H8 161 aaKnown RBP5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 OR51I2Q9H344 312 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 METTL17Q9H7H0 456 aaPredicted RBP5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 ELL3Q9HB65 397 aaPredicted RBP5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 PLGRKTQ9HBL7 147 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 GCM1Q9NP62 436 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 TREM2Q9NZC2 230 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 RNF7Q9UBF6 113 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 POLDIP2Q9Y2S7 368 aa5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 AK6Q9Y3D8 172 aaKnown RBP5.58□□□□□ -1.52
CHRNA3-204ENST00000559002 CACNA1DQ01668 2161 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 DSCAMO60469 2012 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 IGKV1-27A0A075B6S5 117 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 CLDN25C9JDP6 229 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 LYNX1G3V0Z9 82 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 TRAPPC2LH3BP13 241 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 SPRY1O43609 319 aaPredicted RBP5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 SYNGR1O43759 233 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 CDRT1O95170 752 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 CYB5R3P00387 301 aaPredicted RBP5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 CSF3P09919 207 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 TMEM225BP0DP42 221 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 LYNX1P0DP58 116 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 PAX1P15863 534 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 ADRA2CP18825 462 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 RAB3BP20337 219 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 RANBP1P43487 201 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 SERPINB10P48595 397 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 PDLIM4P50479 330 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 TMBIM6P55061 237 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 GMFBP60983 142 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 VBP1P61758 197 aa5.57□□□□□ -1.52
CHRNA3-204ENST00000559002 NCS1P62166 190 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms