RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 NSMAFQ92636 917 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 RNF166Q96A37 237 aaPredicted RBP13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 UPRTQ96BW1 309 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 OR8B4Q96RC9 309 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 OR2H1Q9GZK4 316 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 PLGRKTQ9HBL7 147 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 HMG20AQ9NP66 347 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 AKIP1Q9NQ31 210 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 MIOXQ9UGB7 285 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 MRM2Q9UI43 246 aaKnown RBP13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 GNG8Q9UK08 70 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 COA3Q9Y2R0 106 aaPredicted RBP13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 KLHDC2Q9Y2U9 406 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 FAM181BA6NEQ2 426 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 PRR32B1ATL7 298 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 ZNF593O00488 134 aaPredicted RBP13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 HOXA3O43365 443 aaPredicted RBP13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 ZNF254O75437 659 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 CST2P09228 141 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 IGHV4-38-2P0DP08 117 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 RPS2P15880 293 aaKnown RBP13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 RPS19P39019 145 aaKnown RBP13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 ETV6P41212 452 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 MTNR1BP49286 362 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 RORCP51449 518 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 BMXP51813 675 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 SEC61A1P61619 476 aaKnown RBP13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 GNB2P62879 340 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 PSG7Q13046 419 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 PDCD1Q15116 288 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 OLFML2AQ68BL7 652 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 UNQ9370/PRO34162Q6UXP9 181 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 FOXL2NBQ6ZUU3 175 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 NLRC3Q7RTR2 1065 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 TPRA1Q86W33 373 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 CROCCP3Q8IVE0 287 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 ZNF679Q8IYX0 411 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 KIR3DL3Q8N743 410 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 WFDC12Q8WWY7 111 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 RAB40AQ8WXH6 277 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 BORCS5Q969J3 196 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 TMEM203Q969S6 136 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 NABP1Q96AH0 204 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 WACQ9BTA9 647 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 TMED9Q9BVK6 235 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 WDR12Q9GZL7 423 aaKnown RBP13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 NOX4Q9NPH5 578 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 ACOXLQ9NUZ1 547 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 PEX16Q9Y5Y5 336 aa13.41□□□□□ -0.26
CDC42BPB-203ENST00000558867 IGHV3OR16-10A0A075B7F0 116 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 TRAV40A0A0B4J280 105 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 PNMA8CA0A1B0GUJ8 204 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 SRRM5B3KS81 715 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 PLATP00750 562 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 NGFP01138 241 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 WNT2P09544 360 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 ZNF823P16415 610 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 LAP3P28838 519 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 DCTDP32321 178 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 CCR9P51686 369 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 FMODQ06828 376 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 ZNF846Q147U1 533 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 YIF1BQ5BJH7 314 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 SYT9Q86SS6 491 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 THRSPQ92748 146 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 GHSRQ92847 366 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 WNT5BQ9H1J7 359 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 TBCCD1Q9NVR7 557 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 DCAF16Q9NXF7 216 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 ZNF281Q9Y2X9 895 aa13.4□□□□□ -0.26
CDC42BPB-203ENST00000558867 IGKV1D-43A0A0B4J1Z2 117 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 TRAV1-2A0A0B4J238 106 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 IGHV2-70DA0A0C4DH43 119 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 TRBV2A0A0J9YWF9 115 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 CLPSL1A2RUU4 121 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 ANKRD61A6NGH8 418 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 LRRC30A6NM36 301 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 CEACAM18A8MTB9 384 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 TMEM178BH3BS89 294 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 TMEM127O75204 238 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 CDRT1O95170 752 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 HLA-DQA2P01906 255 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 PSKH1P11801 424 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 OPRL1P41146 370 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 RPL15P61313 204 aaKnown RBP13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 ALKBH1Q13686 389 aaKnown RBP13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 SPRNQ5BIV9 151 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 TMEM255AQ5JRV8 349 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 GPR157Q5UAW9 335 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 MFSD4AQ8N468 514 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 TMEM86BQ8N661 226 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 OR10S1Q8NGN2 331 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 THEM6Q8WUY1 208 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 ITLN1Q8WWA0 313 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 NEIL1Q96FI4 390 aaPredicted RBP13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 MAP6Q96JE9 813 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 FAM71F1Q96KD3 344 aaPredicted RBP13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 WDFY2Q96P53 400 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 CITED1Q99966 193 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 RERGLQ9H628 205 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms