RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 SNRNP40Q96DI7 357 aaKnown RBP6.34□□□□□ -1.39
SPG11-204ENST00000557866 WBP1Q96G27 269 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 RNF170Q96K19 258 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 SLX1AQ9BQ83 275 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 LPAR5Q9H1C0 372 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 BANF2Q9H503 90 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 ZMAT3Q9HA38 289 aaKnown RBP6.34□□□□□ -1.39
SPG11-204ENST00000557866 HRASLSQ9HDD0 168 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 NLKQ9UBE8 527 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 PROCRQ9UNN8 238 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 ACACAQ13085 2346 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 ZNF816-ZNF321PA0A0X1KG74 233 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 FAM240BA0A1B0GVZ2 78 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 FAM230AA0A1W2PPH8 454 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 ANKRD20A5PA0PJZ0 165 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 FOXI3A8MTJ6 420 aaPredicted RBP6.33□□□□□ -1.4
SPG11-204ENST00000557866 H7C417 338 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 SOCS1O15524 211 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 CDC14BO60729 498 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 AGFG2O95081 481 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 MPIG6BO95866 241 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 MT-ND4P03905 459 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 CBR1P16152 277 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 PRKACBP22694 351 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 IDH3GP51553 393 aaPredicted RBP6.33□□□□□ -1.4
SPG11-204ENST00000557866 CAPZA1P52907 286 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 TMEM50BP56557 158 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 DYRK1AQ13627 763 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 SF3B4Q15427 424 aaKnown RBP eCLIP6.33□□□□□ -1.4
SPG11-204ENST00000557866 SLC22A6Q4U2R8 563 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 OLFML2AQ68BL7 652 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 ASCL4Q6XD76 172 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 MOB3CQ70IA8 216 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 TOMM5Q8N4H5 51 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 FAM89BQ8N5H3 189 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 C15orf40Q8WUR7 153 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 CHAC2Q8WUX2 184 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 HPSE2Q8WWQ2 592 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 FCAMRQ8WWV6 532 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 PIGCQ92535 297 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 ITFG2Q969R8 447 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 SEH1LQ96EE3 360 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 GPER1Q99527 375 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 NICN1Q9BSH3 213 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 MARVELD1Q9BSK0 173 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 C1QTNF6Q9BXI9 259 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 OR51B6Q9H340 312 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 ASF1BQ9NVP2 202 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 MTFP1Q9UDX5 166 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 ZNF629Q9UEG4 869 aaPredicted RBP6.33□□□□□ -1.4
SPG11-204ENST00000557866 GPR160Q9UJ42 338 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 ING4Q9UNL4 249 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 ZNF835Q9Y2P0 537 aa6.33□□□□□ -1.4
SPG11-204ENST00000557866 ANKRD11Q6UB99 2663 aaPredicted RBP6.33□□□□□ -1.4
SPG11-204ENST00000557866 ATMQ13315 3056 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 IGKV1-12A0A0C4DH73 117 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 MEIS3P1A6NDR6 274 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 TMEM235A6NFC5 223 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 CD300LBA8K4G0 201 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 ZNF850A8MQ14 1090 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 SULT1C2O00338 296 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 ANGPTL7O43827 346 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 SMPD2O60906 423 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 CRTAPO75718 401 aaPredicted RBP6.32□□□□□ -1.4
SPG11-204ENST00000557866 CST4P01036 141 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 IGKV1D-12P01611 117 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 IGKV3-15P01624 115 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 IGLV1-44P01699 117 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 FCER2P06734 321 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 MELTFP08582 738 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 HOXD4P09016 255 aaPredicted RBP6.32□□□□□ -1.4
SPG11-204ENST00000557866 GSTT2BP0CG30 244 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 UBBP0CG47 229 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 GNB3P16520 340 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 IL32P24001 234 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 GIFP27352 417 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 PRSS3P35030 304 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 ID4P47928 161 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 VEGFCP49767 419 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 CCR6P51684 374 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 FUT6P51993 359 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 MTCP1P56278 107 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 ERVS71-1P61550 626 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 MALLQ13021 153 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 SNTB2Q13425 540 aaKnown RBP6.32□□□□□ -1.4
SPG11-204ENST00000557866 P2RY6Q15077 328 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 CNN3Q15417 329 aaKnown RBP6.32□□□□□ -1.4
SPG11-204ENST00000557866 IGFBP7Q16270 282 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 CDNFQ49AH0 187 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 PLAC9Q5JTB6 97 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 SPATA46Q5T0L3 261 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 AGAP6Q5VW22 663 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 PLCXD3Q63HM9 321 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 RAB12Q6IQ22 244 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 FAAP20Q6NZ36 180 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 PLET1Q6UQ28 207 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 GFRALQ6UXV0 394 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 Q6ZTK2 550 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 LHFPL2Q6ZUX7 228 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 NCCRP1Q6ZVX7 275 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms