RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 ATF1P18846 271 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 HTR1EP28566 365 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 CD70P32970 193 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 APLNRP35414 380 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 RAP1GDS1P52306 607 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 REEP5Q00765 189 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 BAXQ07812 192 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 MGAT3Q09327 533 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 MLLT11Q13015 90 aaPredicted RBP2.77□□□□□ -1.97
TDP1-217ENST00000557782 PRSS8Q16651 343 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 CLEC12BQ2HXU8 276 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 TBC1D28Q2M2D7 210 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 CEACAM16Q2WEN9 425 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 KRTAP24-1Q3LI83 254 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 LCE5AQ5TCM9 118 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 FBXW9Q5XUX1 488 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 DNM1P34Q6PK57 102 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 BLIDQ8IZY5 108 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 GPD1LQ8N335 351 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.77□□□□□ -1.97
TDP1-217ENST00000557782 PIGXQ8TBF5 258 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 BLNKQ8WV28 456 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 SMIM19Q96E16 107 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 SMARCD1Q96GM5 515 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 SFXN3Q9BWM7 321 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 UGT2B28Q9BY64 529 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 SLC19A3Q9BZV2 496 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 VCX3BQ9H321 246 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 TAS2R13Q9NYV9 303 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 TAS2R9Q9NYW1 312 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 DEC1Q9P2X7 70 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 DAPL1A0PJW8 107 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 EFCAB9A8MZ26 197 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 TAAR5O14804 337 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 BIRC5O15392 142 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 MAGEB4O15481 346 aaPredicted RBP2.76□□□□□ -1.97
TDP1-217ENST00000557782 NPIPB7O75200 414 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 SUPT3HO75486 399 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 OR5F1O95221 314 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 TRBV12-3P01733 135 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 IFNA6P05013 189 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 CALB1P05937 261 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 BCHEP06276 602 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 TCN2P20062 427 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 OMGP23515 440 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 DRD3P35462 400 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 GCLMP48507 274 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 PSMD7P51665 324 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 AP2S1P53680 142 aaPredicted RBP2.76□□□□□ -1.97
TDP1-217ENST00000557782 CLDN12P56749 244 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 ACTBP60709 375 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 ACTG1P63261 375 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 ARG2P78540 354 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 HERPUD1Q15011 391 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 RBMY1FQ15415 496 aaKnown RBP2.76□□□□□ -1.97
TDP1-217ENST00000557782 SHHQ15465 462 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 AKIRIN2Q53H80 203 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 TMEM236Q5W0B7 351 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 C10orf67Q8IYJ2 551 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 CCNYL1Q8N7R7 359 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 OR8K1Q8NGG5 319 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 OR10G4Q8NGN3 311 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 OR13G1Q8NGZ3 307 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 PTH2Q96A98 100 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 ANKRD9Q96BM1 317 aaPredicted RBP2.76□□□□□ -1.97
TDP1-217ENST00000557782 OTUB2Q96DC9 234 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 SMIM12Q96EX1 92 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 OR10C1Q96KK4 312 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 CEP170P1Q96L14 293 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 PGLYRP3Q96LB9 341 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 CCDC42Q96M95 316 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 KCTD7Q96MP8 289 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 ZNF599Q96NL3 588 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 WFIKKN1Q96NZ8 548 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 BIRC8Q96P09 236 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 FAAP24Q9BTP7 215 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 TAPBPLQ9BX59 468 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 KRTAP9-3Q9BYQ3 159 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 SLC25A39Q9BZJ4 359 aaPredicted RBP2.76□□□□□ -1.97
TDP1-217ENST00000557782 METTL9Q9H1A3 318 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 FAM206AQ9NX38 181 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 VNN3Q9NY84 501 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 PRSS21Q9Y6M0 314 aa2.76□□□□□ -1.97
TDP1-217ENST00000557782 ZNF608Q9ULD9 1512 aaPredicted RBP2.76□□□□□ -1.97
TDP1-217ENST00000557782 TCF20Q9UGU0 1960 aaKnown RBP2.76□□□□□ -1.97
TDP1-217ENST00000557782 NPHP4O75161 1426 aaPredicted RBP2.76□□□□□ -1.97
TDP1-217ENST00000557782 KIF26BQ2KJY2 2108 aa2.75□□□□□ -1.97
TDP1-217ENST00000557782 PIKFYVEQ9Y2I7 2098 aa2.75□□□□□ -1.97
TDP1-217ENST00000557782 TRAV19A0A0A6YYK7 116 aa2.75□□□□□ -1.97
TDP1-217ENST00000557782 IGKV1-8A0A0C4DH67 115 aa2.75□□□□□ -1.97
TDP1-217ENST00000557782 KLF18A0A0U1RQI7 1052 aa2.75□□□□□ -1.97
TDP1-217ENST00000557782 RBFOX3A6NFN3 312 aa2.75□□□□□ -1.97
TDP1-217ENST00000557782 EPOPA6NHQ4 379 aa2.75□□□□□ -1.97
TDP1-217ENST00000557782 ZFP92A6NM28 416 aa2.75□□□□□ -1.97
TDP1-217ENST00000557782 CEACAM18A8MTB9 384 aa2.75□□□□□ -1.97
TDP1-217ENST00000557782 SRRM5B3KS81 715 aa2.75□□□□□ -1.97
TDP1-217ENST00000557782 I3L4J1 428 aa2.75□□□□□ -1.97
TDP1-217ENST00000557782 MANBAO00462 879 aa2.75□□□□□ -1.97
TDP1-217ENST00000557782 HAT1O14929 419 aa2.75□□□□□ -1.97
TDP1-217ENST00000557782 STX10O60499 249 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms