RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 CEP78Q5JTW2 689 aa11.91□□□□□ -0.5
SUPT16H-208ENST00000557652 GDPGP1Q6ZNW5 385 aa11.91□□□□□ -0.5
SUPT16H-208ENST00000557652 MOGAT3Q86VF5 341 aa11.91□□□□□ -0.5
SUPT16H-208ENST00000557652 Q8IYB0 196 aa11.91□□□□□ -0.5
SUPT16H-208ENST00000557652 SAXO1Q8IYX7 474 aa11.91□□□□□ -0.5
SUPT16H-208ENST00000557652 MUC20Q8N307 709 aaPredicted RBP11.91□□□□□ -0.5
SUPT16H-208ENST00000557652 ZNF525Q8N782 197 aa11.91□□□□□ -0.5
SUPT16H-208ENST00000557652 CCL17Q92583 94 aa11.91□□□□□ -0.5
SUPT16H-208ENST00000557652 OR14A2Q96R54 314 aa11.91□□□□□ -0.5
SUPT16H-208ENST00000557652 TMED9Q9BVK6 235 aa11.91□□□□□ -0.5
SUPT16H-208ENST00000557652 SLITRK2Q9H156 845 aa11.91□□□□□ -0.5
SUPT16H-208ENST00000557652 RASL12Q9NYN1 266 aa11.91□□□□□ -0.5
SUPT16H-208ENST00000557652 VWC2LB2RUY7 222 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 NDUFA2O43678 99 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 INMTO95050 263 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 GRPP07492 148 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 COL8A2P25067 703 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 BDKRB2P30411 391 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 FGF9P31371 208 aaPredicted RBP11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 THBS2P35442 1172 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 TGFBR2P37173 567 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 SOX2P48431 317 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 PSMD7P51665 324 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 NEDD8Q15843 81 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 SSX1Q16384 188 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 TMEM155Q4W5P6 130 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 WDR82Q6UXN9 313 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 FAM90A1Q86YD7 464 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 KRTAP1-3Q8IUG1 177 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 MKXQ8IYA7 352 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 ZSCAN4Q8NAM6 433 aaPredicted RBP11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 SCCPDHQ8NBX0 429 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 OR13C9Q8NGT0 318 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 YIPF5Q969M3 257 aa11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 C12orf43Q96C57 262 aaKnown RBP11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 FOXRED1Q96CU9 486 aaPredicted RBP11.9□□□□□ -0.5
SUPT16H-208ENST00000557652 TEX15Q9BXT5 2789 aa11.9□□□□□ -0.51
SUPT16H-208ENST00000557652 MAST4O15021 2626 aa11.9□□□□□ -0.51
SUPT16H-208ENST00000557652 IGKV1-9A0A0C4DH69 117 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 SRRM5B3KS81 715 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 H3BSH0 61 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 LMX1BO60663 402 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 CDC14BO60729 498 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 LHBP01229 141 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 HEXAP06865 529 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 HCKP08631 526 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 MUC1P15941 1255 aaPredicted RBP11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 MDH2P40926 338 aaKnown RBP11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 NR4A2P43354 598 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 HAAOP46952 286 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 BMXP51813 675 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 MTCP1P56278 107 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 MPPED2Q15777 294 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 HSD17B12Q53GQ0 312 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 PRAMEF6Q5VXH4 476 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 CEACAM19Q7Z692 300 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 WDR86Q86TI4 376 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 C11orf53Q8IXP5 236 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 SPICQ8N5J4 248 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 PNLDC1Q8NA58 520 aaKnown RBP11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 OR13C5Q8NGS8 318 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 AQP3Q92482 292 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 DVL3Q92997 716 aaPredicted RBP11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 DNTTIP1Q9H147 329 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 TCF7L1Q9HCS4 588 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 NOX4Q9NPH5 578 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 PCDHB16Q9NRJ7 776 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 C1orf123Q9NWV4 160 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 STUB1Q9UNE7 303 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 GSTK1Q9Y2Q3 226 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 CR1P17927 2039 aa11.89□□□□□ -0.51
SUPT16H-208ENST00000557652 MED13LQ71F56 2210 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 ABCA1O95477 2261 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 WNK2Q9Y3S1 2297 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 FLNAP21333 2647 aaKnown RBP11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 PPIAL4EA0A075B759 164 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 TRAV1-2A0A0B4J238 106 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 TRAV38-1A0A0B4J264 116 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 FAM230AA0A1W2PPH8 454 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 hCG_1807616A0A1W2PRN6 198 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 A6NIN4 97 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 PPIAL4DF5H284 164 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 GABRPO00591 440 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 CDIPTO14735 213 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 PPIHO43447 177 aaKnown RBP11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 LY6HO94772 140 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 PPIAL4FP0DN26 164 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 SRMP19623 302 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 BTG1P62324 171 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 RPS25P62851 125 aaKnown RBP11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 LOXL1Q08397 574 aaPredicted RBP11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 KISS1Q15726 138 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 HAGHLQ6PII5 290 aaPredicted RBP11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 PXT1Q8NFP0 134 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 UQCC2Q9BRT2 126 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 SEBOXQ9HB31 216 aaPredicted RBP11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 SNTG1Q9NSN8 517 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 UFSP2Q9NUQ7 469 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 TAS2R4Q9NYW5 299 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 SSR3Q9UNL2 185 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms