RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, human

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHMT2-223	ENST00000556689	KLHL12	Q53G59	568 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	FAM57B	Q71RH2	274 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	PRSS45	Q7RTY3	260 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	MKX	Q8IYA7	352 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	ADGRG5	Q8IZF4	528 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	FAM185A	Q8N0U4	392 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689		Q8N2B8	174 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	SLC37A3	Q8NCC5	494 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	ZNRF1	Q8ND25	227 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	WFDC9	Q8NEX5	89 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	OR52L1	Q8NGH7	329 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	CANT1	Q8WVQ1	401 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	OR5P3	Q8WZ94	311 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	RNF170	Q96K19	258 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	OR10A2	Q9H208	303 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	EGLN3	Q9H6Z9	239 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	REEP1	Q9H902	201 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	ZNF702P	Q9H963	129 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	ELL3	Q9HB65	397 aa	Predicted RBP	10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	S100A14	Q9HCY8	104 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	ABCB9	Q9NP78	766 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	IL1RAP	Q9NPH3	570 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	ARMC1	Q9NVT9	282 aa		10.26	□□□□□ -0.77
SHMT2-223	ENST00000556689	NOTCH3	Q9UM47	2321 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689		A0A1W2PPH5	198 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	ZNF850	A8MQ14	1090 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	ADARB2-AS1	A8MUL3	147 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	PEX14	O75381	377 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	CST1	P01037	141 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	PSG2	P11465	335 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	IGLL1	P15814	213 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	PAICS	P22234	425 aa	Known RBP	10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	GLRA1	P23415	457 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	ZNF121	P58317	390 aa	Predicted RBP	10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	PRDX4	Q13162	271 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	EIF2B1	Q14232	305 aa	Known RBP	10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	GFOD2	Q3B7J2	385 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	DEFB121	Q5J5C9	76 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	RPL13AP3	Q6NVV1	102 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	TIGD4	Q8IY51	512 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	PAPD5	Q8NDF8	572 aa	Known RBP	10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	PGAM5	Q96HS1	289 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	CHID1	Q9BWS9	393 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	CDCA4	Q9BXL8	241 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	PRSS22	Q9GZN4	317 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	RGCC	Q9H4X1	137 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	BRD7	Q9NPI1	651 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	DNAJC27	Q9NZQ0	273 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	ZNF319	Q9P2F9	582 aa		10.25	□□□□□ -0.77
SHMT2-223	ENST00000556689	IGKV1D-17	A0A075B6S4	117 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	hCG_1809904	A0A1W2PP81	198 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689		A0A1W2PPE2	198 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689		A0A1W2PR64	198 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689		A0A1W2PRV1	198 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	VGLL3	A8MV65	326 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	KRT36	O76013	467 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	CST4	P01036	141 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	GYPB	P06028	91 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	MAGEA2	P43356	314 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	CAPZA1	P52907	286 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	BLVRA	P53004	296 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	SLC25A1	P53007	311 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	RIPK1	Q13546	671 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	OR2T5	Q6IEZ7	315 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	TMEM185A	Q8NFB2	350 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	OR6K6	Q8NGW6	343 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	OR2T29	Q8NH02	315 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	OR5K1	Q8NHB7	308 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	WIPF2	Q8TF74	440 aa	Predicted RBP	10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	PIGC	Q92535	297 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	HIST1H2AA	Q96QV6	131 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	WNT10A	Q9GZT5	417 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	IL20	Q9NYY1	176 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	DNAJB9	Q9UBS3	223 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	CDH10	Q9Y6N8	788 aa		10.24	□□□□□ -0.77
SHMT2-223	ENST00000556689	FAM90A8P	A6NJQ4	464 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689		K7EIL1	84 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	RHBDL1	O75783	438 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	SEMG1	P04279	462 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	SPI1	P17947	270 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	RRM2	P31350	389 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	DCTD	P32321	178 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	RAB13	P51153	203 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	RPL31	P62899	125 aa	Known RBP	10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	CRMP1	Q14194	572 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	CNN3	Q15417	329 aa	Known RBP	10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	ATP6AP1	Q15904	470 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	TMEM200B	Q69YZ2	307 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	C11orf87	Q6NUJ2	197 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	CCBE1	Q6UXH8	406 aa	Predicted RBP	10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	ZDHHC23	Q8IYP9	409 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	LINC00471	Q8N535	108 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	C11orf42	Q8N5U0	333 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	ZNF671	Q8TAW3	534 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	RNF133	Q8WVZ7	376 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	SDSL	Q96GA7	329 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	CENPN	Q96H22	339 aa	Predicted RBP	10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	OR5M11	Q96RB7	305 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	ABHD6	Q9BV23	337 aa		10.23	□□□□□ -0.77
SHMT2-223	ENST00000556689	NMNAT2	Q9BZQ4	307 aa		10.23	□□□□□ -0.77

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