RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 PRSS3P2Q8NHM4 247 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 C8orf46Q8TAG6 207 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 MUC7Q8TAX7 377 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 LRRC8CQ8TDW0 803 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 SPRYD4Q8WW59 207 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-239ENST00000556315 SLC7A6Q92536 515 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 RORBQ92753 470 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 NKX3-1Q99801 234 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-239ENST00000556315 PRSS27Q9BQR3 290 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 CHID1Q9BWS9 393 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 RABEP2Q9H5N1 569 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 METTL8Q9H825 291 aaKnown RBP3.89□□□□□ -1.79
ATXN3-239ENST00000556315 ZNF702PQ9H963 129 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 SDR39U1Q9NRG7 319 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-239ENST00000556315 PAPOLBQ9NRJ5 636 aaKnown RBP3.89□□□□□ -1.79
ATXN3-239ENST00000556315 INPP5EQ9NRR6 644 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 ATPIF1Q9UII2 106 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 PLXNB1O43157 2135 aa3.89□□□□□ -1.79
ATXN3-239ENST00000556315 RYR2Q92736 4967 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 TCRBV4S1A1TA0A5B7 111 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 EVPLLA8MZ36 301 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 M0R1W7 72 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 UBDO15205 165 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 HDAC3O15379 428 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 CHST1O43916 411 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 GMDSO60547 372 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 CLIC3O95833 236 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 ALDOBP05062 364 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 TROVE2P10155 538 aaKnown RBP eCLIP3.88□□□□□ -1.79
ATXN3-239ENST00000556315 MUC1P15941 1255 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-239ENST00000556315 GPX2P18283 190 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 CA6P23280 308 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 HOXD3P31249 432 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-239ENST00000556315 TGM4P49221 684 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 VAMP2P63027 116 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 PRB3Q04118 309 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-239ENST00000556315 ZNF91Q05481 1191 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 ECH1Q13011 328 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 KLRD1Q13241 179 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 AQP6Q13520 282 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 GK2Q14410 553 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-239ENST00000556315 OR8G1Q15617 311 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 ANKDD1AQ495B1 522 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 LRRC10Q5BKY1 277 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 DMRTC1Q5HYR2 192 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 LRIF1Q5T3J3 769 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 MORN5Q5VZ52 161 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 SLC2A7Q6PXP3 512 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 UNQ9370/PRO34162Q6UXP9 181 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 COLCA1Q6ZS62 124 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 PGAP1Q75T13 922 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 CPOQ8IVL8 374 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 NKAIN4Q8IVV8 208 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 MSRB3Q8IXL7 192 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 GCSAMQ8N6F7 178 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 GJC3Q8NFK1 279 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 GPR32P1Q8NGA4 272 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 OR5AU1Q8NGC0 362 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 OR4D11Q8NGI4 311 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 OR5D13Q8NGL4 314 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 PFN4Q8NHR9 129 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 PIFOQ8TCI5 191 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 TMEM239Q8WW34 195 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 ACOT11Q8WXI4 607 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-239ENST00000556315 SLCO4A1Q96BD0 722 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 CCL13Q99616 98 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 COQ7Q99807 217 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 SIKE1Q9BRV8 207 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 CCDC28BQ9BUN5 200 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 MCRIP2Q9BUT9 160 aaKnown RBP3.88□□□□□ -1.79
ATXN3-239ENST00000556315 KRTAP1-5Q9BYS1 174 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 DCLRE1BQ9H816 532 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 WDR76Q9H967 626 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 C1orf123Q9NWV4 160 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 SLC25A37Q9NYZ2 338 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 PRPF19Q9UMS4 504 aaKnown RBP3.88□□□□□ -1.79
ATXN3-239ENST00000556315 MED31Q9Y3C7 131 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 LRRC42Q9Y546 428 aa3.88□□□□□ -1.79
ATXN3-239ENST00000556315 TSSC4Q9Y5U2 329 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-239ENST00000556315 TET2Q6N021 2002 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-239ENST00000556315 IGHV3OR15-7A0A075B7D8 119 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 TEX13CA0A0J9YWL9 993 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 hCG_1807616A0A1W2PRN6 198 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 CD300LBA8K4G0 201 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 XKRYO14609 159 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 RER1O15258 196 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 CCDC22O60826 627 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 EDF1O60869 148 aaKnown RBP3.87□□□□□ -1.79
ATXN3-239ENST00000556315 RAMP3O60896 148 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 KHDRBS3O75525 346 aaKnown RBP3.87□□□□□ -1.79
ATXN3-239ENST00000556315 GLCEO94923 617 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 OR5F1O95221 314 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 LCATP04180 440 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 IFNW1P05000 195 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 LYL1P12980 280 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 CTLA4P16410 223 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 CALB2P22676 271 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 POU1F1P28069 291 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 NAA10P41227 235 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-239ENST00000556315 GSK3BP49841 420 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms