RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.99■□□□□ 0.31
VTI1B-205ENST00000555543 RHOXF1Q8NHV9 184 aa16.99■□□□□ 0.31
VTI1B-205ENST00000555543 ST8SIA4Q92187 359 aa16.99■□□□□ 0.31
VTI1B-205ENST00000555543 AQP3Q92482 292 aa16.99■□□□□ 0.31
VTI1B-205ENST00000555543 LGALS12Q96DT0 336 aa16.99■□□□□ 0.31
VTI1B-205ENST00000555543 SUCNR1Q9BXA5 334 aa16.99■□□□□ 0.31
VTI1B-205ENST00000555543 ESM1Q9NQ30 184 aa16.99■□□□□ 0.31
VTI1B-205ENST00000555543 DNAJB11Q9UBS4 358 aa16.99■□□□□ 0.31
VTI1B-205ENST00000555543 EXOGQ9Y2C4 368 aaKnown RBP16.99■□□□□ 0.31
VTI1B-205ENST00000555543 TRAV40A0A0B4J280 105 aa16.98■□□□□ 0.31
VTI1B-205ENST00000555543 LOC100130705A0A1B0GUX0 176 aa16.98■□□□□ 0.31
VTI1B-205ENST00000555543 DAPL1A0PJW8 107 aa16.98■□□□□ 0.31
VTI1B-205ENST00000555543 DHRS7CA6NNS2 312 aa16.98■□□□□ 0.31
VTI1B-205ENST00000555543 DBTP11182 482 aaKnown RBP16.98■□□□□ 0.31
VTI1B-205ENST00000555543 ACTC1P68032 377 aa16.98■□□□□ 0.31
VTI1B-205ENST00000555543 ACTA1P68133 377 aa16.98■□□□□ 0.31
VTI1B-205ENST00000555543 CD276Q5ZPR3 534 aa16.98■□□□□ 0.31
VTI1B-205ENST00000555543 BTN2A1Q7KYR7 527 aa16.98■□□□□ 0.31
VTI1B-205ENST00000555543 SOX21Q9Y651 276 aaPredicted RBP16.98■□□□□ 0.31
VTI1B-205ENST00000555543 TENM1Q9UKZ4 2725 aa16.97■□□□□ 0.31
VTI1B-205ENST00000555543 A0A1B0GVI7 797 aa16.97■□□□□ 0.31
VTI1B-205ENST00000555543 LOC107986453A0A1B0GWG9 222 aa16.97■□□□□ 0.31
VTI1B-205ENST00000555543 SLC16A6O15403 523 aa16.97■□□□□ 0.31
VTI1B-205ENST00000555543 SFTPBP07988 381 aa16.97■□□□□ 0.31
VTI1B-205ENST00000555543 FPR2P25090 351 aa16.97■□□□□ 0.31
VTI1B-205ENST00000555543 OR12D2P58182 307 aa16.97■□□□□ 0.31
VTI1B-205ENST00000555543 ATPAF1Q5TC12 328 aaPredicted RBP16.97■□□□□ 0.31
VTI1B-205ENST00000555543 RDH10Q8IZV5 341 aa16.97■□□□□ 0.31
VTI1B-205ENST00000555543 SIGLECL1Q8N7X8 197 aa16.97■□□□□ 0.31
VTI1B-205ENST00000555543 ANGPTL6Q8NI99 470 aa16.97■□□□□ 0.31
VTI1B-205ENST00000555543 APH1BQ8WW43 257 aa16.97■□□□□ 0.31
VTI1B-205ENST00000555543 GAFA1Q96PS6 74 aa16.97■□□□□ 0.31
VTI1B-205ENST00000555543 AMBNQ9NP70 447 aa16.97■□□□□ 0.31
VTI1B-205ENST00000555543 SMPD3Q9NY59 655 aaPredicted RBP16.97■□□□□ 0.31
VTI1B-205ENST00000555543 NLKQ9UBE8 527 aa16.97■□□□□ 0.31
VTI1B-205ENST00000555543 PQLC2LA1A4F0 135 aa16.96■□□□□ 0.31
VTI1B-205ENST00000555543 SYT7O43581 403 aa16.96■□□□□ 0.31
VTI1B-205ENST00000555543 SYNGR1O43759 233 aa16.96■□□□□ 0.31
VTI1B-205ENST00000555543 PLATP00750 562 aa16.96■□□□□ 0.31
VTI1B-205ENST00000555543 MMP9P14780 707 aa16.96■□□□□ 0.31
VTI1B-205ENST00000555543 GLRA1P23415 457 aa16.96■□□□□ 0.31
VTI1B-205ENST00000555543 TGM4P49221 684 aa16.96■□□□□ 0.31
VTI1B-205ENST00000555543 NANOS3P60323 173 aaKnown RBP16.96■□□□□ 0.31
VTI1B-205ENST00000555543 IKZF1Q13422 519 aa16.96■□□□□ 0.31
VTI1B-205ENST00000555543 LRRC36Q1X8D7 754 aa16.96■□□□□ 0.31
VTI1B-205ENST00000555543 ZNF788Q6ZQV5 615 aa16.96■□□□□ 0.31
VTI1B-205ENST00000555543 SLC36A1Q7Z2H8 476 aa16.96■□□□□ 0.31
VTI1B-205ENST00000555543 ACBD7Q8N6N7 88 aa16.96■□□□□ 0.31
VTI1B-205ENST00000555543 ZDHHC22Q8N966 263 aa16.96■□□□□ 0.31
VTI1B-205ENST00000555543 OR2G2Q8NGZ5 317 aa16.96■□□□□ 0.31
VTI1B-205ENST00000555543 ZNF488Q96MN9 340 aa16.96■□□□□ 0.31
VTI1B-205ENST00000555543 ZNF48Q96MX3 618 aaPredicted RBP16.96■□□□□ 0.31
VTI1B-205ENST00000555543 MYRFQ9Y2G1 1151 aa16.96■□□□□ 0.31
VTI1B-205ENST00000555543 IGKV1D-17A0A075B6S4 117 aa16.95■□□□□ 0.3
VTI1B-205ENST00000555543 ANKRD61A6NGH8 418 aa16.95■□□□□ 0.3
VTI1B-205ENST00000555543 SNTNA6NMZ2 147 aa16.95■□□□□ 0.3
VTI1B-205ENST00000555543 ZNF879B4DU55 563 aa16.95■□□□□ 0.3
VTI1B-205ENST00000555543 J3QT63 122 aa16.95■□□□□ 0.3
VTI1B-205ENST00000555543 MPZL2O60487 215 aa16.95■□□□□ 0.3
VTI1B-205ENST00000555543 HAAOP46952 286 aa16.95■□□□□ 0.3
VTI1B-205ENST00000555543 RCN1Q15293 331 aa16.95■□□□□ 0.3
VTI1B-205ENST00000555543 LPCAT4Q643R3 524 aa16.95■□□□□ 0.3
VTI1B-205ENST00000555543 TRMT10AQ8TBZ6 339 aaKnown RBP16.95■□□□□ 0.3
VTI1B-205ENST00000555543 NPRL2Q8WTW4 380 aa16.95■□□□□ 0.3
VTI1B-205ENST00000555543 TBX15Q96SF7 602 aa16.95■□□□□ 0.3
VTI1B-205ENST00000555543 PCGF1Q9BSM1 259 aa16.95■□□□□ 0.3
VTI1B-205ENST00000555543 DNTTIP1Q9H147 329 aa16.95■□□□□ 0.3
VTI1B-205ENST00000555543 PLEKHA1Q9HB21 404 aa16.95■□□□□ 0.3
VTI1B-205ENST00000555543 FRRS1LQ9P0K9 344 aa16.95■□□□□ 0.3
VTI1B-205ENST00000555543 RPUSD1Q9UJJ7 312 aaKnown RBP16.95■□□□□ 0.3
VTI1B-205ENST00000555543 ZNF222Q9UK12 451 aa16.95■□□□□ 0.3
VTI1B-205ENST00000555543 NKX6-3A6NJ46 265 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 OR2AT4A6NND4 320 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 IGHA1P01876 353 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 UBCP0CG48 685 aaKnown RBP16.94■□□□□ 0.3
VTI1B-205ENST00000555543 PSG2P11465 335 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 PEX2P28328 305 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 UBE2V2Q15819 145 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 SMN1Q16637 294 aaKnown RBP16.94■□□□□ 0.3
VTI1B-205ENST00000555543 DGUOKQ16854 277 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 FDX2Q6P4F2 183 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 BRD3OSQ6XYD6 125 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 KCTD20Q7Z5Y7 419 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 LHFPL3Q86UP9 236 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 ZNF573Q86YE8 665 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 PNLDC1Q8NA58 520 aaKnown RBP16.94■□□□□ 0.3
VTI1B-205ENST00000555543 POC1AQ8NBT0 407 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 ZNF671Q8TAW3 534 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 ZFAND2BQ8WV99 257 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 PELI1Q96FA3 418 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 C4orf36Q96KX1 117 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 RDH12Q96NR8 316 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 ZNF649Q9BS31 505 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 MS4A7Q9GZW8 240 aaPredicted RBP16.94■□□□□ 0.3
VTI1B-205ENST00000555543 SIRPDQ9H106 197 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 PCDHGB1Q9Y5G3 927 aa16.94■□□□□ 0.3
VTI1B-205ENST00000555543 H0YHG0 523 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 J3QLW9 94 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 SIGLEC5O15389 551 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 NDUFB3O43676 98 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms