RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 DCAF10Q5QP82 559 aa7.54□□□□□ -1.2
LINC00641-201ENST00000555379 DYNC2LI1Q8TCX1 351 aa7.54□□□□□ -1.2
LINC00641-201ENST00000555379 CLDN23Q96B33 292 aa7.54□□□□□ -1.2
LINC00641-201ENST00000555379 OR6C68A6NDL8 312 aa7.54□□□□□ -1.2
LINC00641-201ENST00000555379 A6NDN8 102 aa7.54□□□□□ -1.2
LINC00641-201ENST00000555379 UMAD1C9J7I0 102 aa7.54□□□□□ -1.2
LINC00641-201ENST00000555379 GDNFP39905 211 aa7.54□□□□□ -1.2
LINC00641-201ENST00000555379 ERVFRD-1P60508 538 aa7.54□□□□□ -1.2
LINC00641-201ENST00000555379 MPPED2Q15777 294 aa7.54□□□□□ -1.2
LINC00641-201ENST00000555379 FJX1Q86VR8 437 aa7.54□□□□□ -1.2
LINC00641-201ENST00000555379 MARVELD3Q96A59 401 aa7.54□□□□□ -1.2
LINC00641-201ENST00000555379 NRSN2Q9GZP1 204 aa7.54□□□□□ -1.2
LINC00641-201ENST00000555379 GCM1Q9NP62 436 aa7.54□□□□□ -1.2
LINC00641-201ENST00000555379 SLC22A13Q9Y226 551 aa7.54□□□□□ -1.2
LINC00641-201ENST00000555379 LOC390937A0A1W2PQ73 354 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 E5RGE8 158 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 H3BSH0 61 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 J3KTA2 159 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 DHRS3O75911 302 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 CLDN1O95832 211 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 STAG3L3P0CL85 134 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 ZFP36L2P47974 494 aaKnown RBP7.53□□□□□ -1.2
LINC00641-201ENST00000555379 NPY4RP50391 375 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 INSM1Q01101 510 aaPredicted RBP7.53□□□□□ -1.2
LINC00641-201ENST00000555379 RELQ04864 619 aaPredicted RBP7.53□□□□□ -1.2
LINC00641-201ENST00000555379 CLINT1Q14677 625 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 SLC25A42Q86VD7 318 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 SHISA5Q8N114 240 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 ZNF552Q9H707 407 aaPredicted RBP7.53□□□□□ -1.2
LINC00641-201ENST00000555379 GALNT9Q9HCQ5 603 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 ELOVL5Q9NYP7 299 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 C16orf97H3BN30 126 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 DEDDO75618 318 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 TUSC2O75896 110 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 FBXO45P0C2W1 286 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 ACP1P24666 158 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 CSF2RBP32927 897 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 SMAGPQ0VAQ4 97 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 TMEM267Q0VDI3 215 aaPredicted RBP7.53□□□□□ -1.2
LINC00641-201ENST00000555379 OR5I1Q13606 314 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 DOLPP1Q86YN1 238 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 HSD17B8Q92506 261 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 GPR84Q9NQS5 396 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 GPR173Q9NS66 373 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 MEIKINA0A087WXM9 373 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 SP1P08047 785 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 OR10J1P30954 320 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 UBE2G2P60604 165 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 RPL24P83731 157 aaKnown RBP7.53□□□□□ -1.2
LINC00641-201ENST00000555379 CST9LP1Q5W188 147 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 TOMM20LQ6UXN7 152 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 WNT2BQ93097 391 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 UTP4Q969X6 686 aaKnown RBP7.53□□□□□ -1.2
LINC00641-201ENST00000555379 SMIM30A4D0T7 59 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 SNRPGP15A8MWD9 76 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 B4GALT3O60512 393 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 PTP4A3O75365 173 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 HIST1H1CP16403 213 aaKnown RBP7.53□□□□□ -1.2
LINC00641-201ENST00000555379 GP2P55259 537 aaKnown RBP7.53□□□□□ -1.2
LINC00641-201ENST00000555379 ZP4Q12836 540 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 NKAIN4Q8IVV8 208 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 RIMKLAQ8IXN7 391 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 ZNF485Q8NCK3 441 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 OR10D3Q8NH80 312 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 APH1BQ8WW43 257 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 SLCO4A1Q96BD0 722 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 ZC3HAV1LQ96H79 300 aaKnown RBP7.53□□□□□ -1.2
LINC00641-201ENST00000555379 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.53□□□□□ -1.2
LINC00641-201ENST00000555379 MYO5AQ9Y4I1 1855 aaKnown RBP7.53□□□□□ -1.2
LINC00641-201ENST00000555379 OTOL1A6NHN0 477 aaPredicted RBP7.53□□□□□ -1.2
LINC00641-201ENST00000555379 DVL1O14640 695 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 NCR1O76036 304 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 FGF2P09038 288 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 ACAA1P09110 424 aaPredicted RBP7.53□□□□□ -1.2
LINC00641-201ENST00000555379 OMGP23515 440 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 PCSK6P29122 969 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 DCTDP32321 178 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 PSMB3P49720 205 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 DVL1P1P54792 670 aaPredicted RBP7.53□□□□□ -1.2
LINC00641-201ENST00000555379 TCTAP57738 103 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 TNFAIP6P98066 277 aaPredicted RBP7.53□□□□□ -1.2
LINC00641-201ENST00000555379 ZNF385BQ569K4 471 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 TMEM88Q6PEY1 159 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 MAMSTRQ6ZN01 415 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 PFN4Q8NHR9 129 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 FYTTD1Q96QD9 318 aaKnown RBP7.53□□□□□ -1.2
LINC00641-201ENST00000555379 DOK1Q99704 481 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 CITED1Q99966 193 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 ALX4Q9H161 411 aaPredicted RBP7.53□□□□□ -1.2
LINC00641-201ENST00000555379 GHITMQ9H3K2 345 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 AKIP1Q9NQ31 210 aa7.53□□□□□ -1.2
LINC00641-201ENST00000555379 DNAJB12Q9NXW2 375 aaKnown RBP7.53□□□□□ -1.2
LINC00641-201ENST00000555379 LOC285556D6RIA3 1793 aa7.52□□□□□ -1.2
LINC00641-201ENST00000555379 SOCS6O14544 535 aa7.52□□□□□ -1.21
LINC00641-201ENST00000555379 SNCGO76070 127 aa7.52□□□□□ -1.21
LINC00641-201ENST00000555379 LIMS3P0CW19 117 aa7.52□□□□□ -1.21
LINC00641-201ENST00000555379 LIMS4P0CW20 117 aa7.52□□□□□ -1.21
LINC00641-201ENST00000555379 DDTP30046 118 aa7.52□□□□□ -1.21
LINC00641-201ENST00000555379 HMGA2P52926 109 aa7.52□□□□□ -1.21
LINC00641-201ENST00000555379 ZNF117Q03924 483 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms