RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 PPIAL4DF5H284 164 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 PIP5K1CO60331 668 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 DOK2O60496 412 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 TPPPO94811 219 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 DHFRP00374 187 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 NGFP01138 241 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 FSHBP01225 129 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 IGHV2-70P01814 119 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 CD55P08174 381 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 ADH4P08319 380 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 CST2P09228 141 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 PPIAL4FP0DN26 164 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 IFI30P13284 250 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 MSR1P21757 451 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 HTR5AP47898 357 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 ZNF133P52736 654 aaPredicted RBP7.44□□□□□ -1.22
TDP1-208ENST00000553989 RPL27P61353 136 aaKnown RBP7.44□□□□□ -1.22
TDP1-208ENST00000553989 SEC61A1P61619 476 aaKnown RBP7.44□□□□□ -1.22
TDP1-208ENST00000553989 IFITM2Q01629 132 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 SPRNQ5BIV9 151 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 TMEM255AQ5JRV8 349 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 CLEC12AQ5QGZ9 265 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 FAM27BQ5VT28 67 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 CNIH2Q6PI25 160 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 SMARCD3Q6STE5 483 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 BTNL3Q6UXE8 466 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 TREML4Q6UXN2 200 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 SPATC1Q76KD6 591 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 DOK3Q7L591 496 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 BCL6BQ8N143 479 aaPredicted RBP7.44□□□□□ -1.22
TDP1-208ENST00000553989 NPEPL1Q8NDH3 523 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 HAVCR2Q8TDQ0 301 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 DVL3Q92997 716 aaPredicted RBP7.44□□□□□ -1.22
TDP1-208ENST00000553989 CREB3L1Q96BA8 519 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 EAF1Q96JC9 268 aaPredicted RBP7.44□□□□□ -1.22
TDP1-208ENST00000553989 NEDD4LQ96PU5 975 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 TEAD3Q99594 435 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 KCNJ15Q99712 375 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 C7orf50Q9BRJ6 194 aaKnown RBP7.44□□□□□ -1.22
TDP1-208ENST00000553989 ZNF649Q9BS31 505 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 MARVELD1Q9BSK0 173 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 ALG12Q9BV10 488 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 WNT5BQ9H1J7 359 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 OR52D1Q9H346 318 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 PATZ1Q9HBE1 687 aaKnown RBP7.44□□□□□ -1.22
TDP1-208ENST00000553989 DIABLOQ9NR28 239 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 CMC2Q9NRP2 79 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 PLEK2Q9NYT0 353 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 ABRACLQ9P1F3 81 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 COPZ2Q9P299 210 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 PPP1R3CQ9UQK1 317 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 TMA7Q9Y2S6 64 aaKnown RBP7.44□□□□□ -1.22
TDP1-208ENST00000553989 TENM1Q9UKZ4 2725 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 A6NIZ1 184 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 NPIPB13A6NJU9 1138 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 NPIPB4C9JG80 1138 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 H7C1C5 153 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 LYRM1O43325 122 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 HPGDSO60760 199 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 GATBO75879 557 aaKnown RBP7.43□□□□□ -1.22
TDP1-208ENST00000553989 ARL6IP5O75915 188 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 GPANK1O95872 356 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 OR2T7P0C7T2 308 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 RPS2P15880 293 aaKnown RBP7.43□□□□□ -1.22
TDP1-208ENST00000553989 SLC6A6P31641 620 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 RBMXP38159 391 aaKnown RBP7.43□□□□□ -1.22
TDP1-208ENST00000553989 MDH2P40926 338 aaKnown RBP7.43□□□□□ -1.22
TDP1-208ENST00000553989 PITPNBP48739 271 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 RAG2P55895 527 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 CTXN1P60606 82 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 RAP1BP61224 184 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 LCN6P62502 163 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 RAP1AP62834 184 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 IL13RA1P78552 427 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 DEFA6Q01524 100 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 SCRN3Q0VDG4 424 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 PSG7Q13046 419 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 MRPL28Q13084 256 aaKnown RBP7.43□□□□□ -1.22
TDP1-208ENST00000553989 IL18Q14116 193 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 ZMYND11Q15326 602 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 CCDC58Q4VC31 144 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 TMEM155Q4W5P6 130 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 FAM205BPQ63HN1 556 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 PYHIN1Q6K0P9 492 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 SLC25A47Q6Q0C1 308 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 KLBQ86Z14 1044 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 MUC20Q8N307 709 aaPredicted RBP7.43□□□□□ -1.22
TDP1-208ENST00000553989 OR52E2Q8NGJ4 325 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 OR2T27Q8NH04 317 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 C15orf40Q8WUR7 153 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 ITLN1Q8WWA0 313 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 BPIFA2Q96DR5 249 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 ALG8Q9BVK2 526 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 TMED9Q9BVK6 235 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 IFT27Q9BW83 186 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 ZCCHC4Q9H5U6 513 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 EMC7Q9NPA0 242 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 PTTG3PQ9NZH4 202 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 ING4Q9UNL4 249 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 HIF3AQ9Y2N7 669 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms