RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ZNF30P17039 623 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 RCC1P18754 421 aaPredicted RBP1.64□□□□□ -2.15
SRP54-204ENST00000553923 RAB3AP20336 220 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 PSMB1P20618 241 aaKnown RBP1.64□□□□□ -2.15
SRP54-204ENST00000553923 RPS12P25398 132 aaKnown RBP1.64□□□□□ -2.15
SRP54-204ENST00000553923 PAX6P26367 422 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 PSMB9P28065 219 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 RCVRNP35243 200 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 MYCNOSP40205 109 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 MDH2P40926 338 aaKnown RBP1.64□□□□□ -2.15
SRP54-204ENST00000553923 CYB561P49447 251 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 PSMB2P49721 201 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 GDI2P50395 445 aaKnown RBP1.64□□□□□ -2.15
SRP54-204ENST00000553923 STC1P52823 247 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 NKX2-5P52952 324 aaPredicted RBP1.64□□□□□ -2.15
SRP54-204ENST00000553923 AP2S1P53680 142 aaPredicted RBP1.64□□□□□ -2.15
SRP54-204ENST00000553923 ACTBP60709 375 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 UBE2NP61088 152 aaKnown RBP1.64□□□□□ -2.15
SRP54-204ENST00000553923 LYZP61626 148 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 ACTG1P63261 375 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 ARG2P78540 354 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 SLC7A9P82251 487 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 DR1Q01658 176 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 ZNF45Q02386 682 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 GLO1Q04760 184 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 EGFEM1PQ0D2K5 195 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 MLLT11Q13015 90 aaPredicted RBP1.64□□□□□ -2.15
SRP54-204ENST00000553923 NAB1Q13506 487 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 GINS1Q14691 196 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 PMVKQ15126 192 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 PRR4Q16378 134 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 SGCAQ16586 387 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 GUCA2BQ16661 112 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 TTLL9Q3SXZ7 439 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 SLC36A2Q495M3 483 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 XKRXQ6PP77 449 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 IGFL3Q6UXB1 125 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 PAMR1Q6UXH9 720 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 RFLNAQ6ZTI6 216 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 STRADAQ7RTN6 431 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 SLC13A5Q86YT5 568 aaPredicted RBP1.64□□□□□ -2.15
SRP54-204ENST00000553923 TRAPPC5Q8IUR0 188 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 WDFY1Q8IWB7 410 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 HS3ST5Q8IZT8 346 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 FAM71E2Q8N5Q1 922 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 C2orf73Q8N5S3 287 aaPredicted RBP1.64□□□□□ -2.15
SRP54-204ENST00000553923 CD177Q8N6Q3 437 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 NPWQ8N729 165 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 CCNYL1Q8N7R7 359 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 NKAPP1Q8N9T2 125 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 OR5L1Q8NGL2 311 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 OR6N1Q8NGY5 312 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 OR51Q1Q8NH59 317 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 OR4S2Q8NH73 311 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 OR1S1Q8NH92 325 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 ZFAND1Q8TCF1 268 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 BLNKQ8WV28 456 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 GTSF1Q8WW33 167 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 RGP1Q92546 391 aaPredicted RBP1.64□□□□□ -2.15
SRP54-204ENST00000553923 TESCQ96BS2 214 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 HAUS1Q96CS2 278 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 OPTNQ96CV9 577 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 DDIT4LQ96D03 193 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 YIPF6Q96EC8 236 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 AURKBQ96GD4 344 aaPredicted RBP1.64□□□□□ -2.15
SRP54-204ENST00000553923 KCTD7Q96MP8 289 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 RDH12Q96NR8 316 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 RBP7Q96R05 134 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 OR2M4Q96R27 311 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 METTL26Q96S19 204 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 SULT4A1Q9BR01 284 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 C9orf16Q9BUW7 83 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 TMED9Q9BVK6 235 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 CDCA4Q9BXL8 241 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 DERL2Q9GZP9 239 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 METTL9Q9H1A3 318 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 MFSD1Q9H3U5 465 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 FBXL15Q9H469 300 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 PRORYQ9H606 182 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 ASB8Q9H765 288 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 METTL8Q9H825 291 aaKnown RBP1.64□□□□□ -2.15
SRP54-204ENST00000553923 TRIM45Q9H8W5 580 aaPredicted RBP1.64□□□□□ -2.15
SRP54-204ENST00000553923 RHOFQ9HBH0 211 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 TMEM27Q9HBJ8 222 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 BABAM2Q9NXR7 383 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 COMMD9Q9P000 198 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 RAB22AQ9UL26 194 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 GUCA1BQ9UMX6 200 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 SIGLEC9Q9Y336 463 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 HES2Q9Y543 173 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 LRRC42Q9Y546 428 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 SNX10Q9Y5X0 201 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 F11RQ9Y624 299 aaKnown RBP1.64□□□□□ -2.15
SRP54-204ENST00000553923 NFASCO94856 1347 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 PLB1Q6P1J6 1458 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 RAB3GAP2Q9H2M9 1393 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 TRAV19A0A0A6YYK7 116 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 IGHV1-69DA0A0B4J2H0 117 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 A0A0G2JN53 185 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 TINCRA0A1B0GVN0 87 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms