RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 CHST5Q9GZS9 411 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 SHARPINQ9H0F6 387 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 TRIM36Q9NQ86 728 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 TMEM160Q9NX00 188 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 TRBV2A0A0J9YWF9 115 aa19.06■□□□□ 0.64
TDP1-206ENST00000553569 FAM230AA0A1W2PPH8 454 aa19.06■□□□□ 0.64
TDP1-206ENST00000553569 PQLC2LA1A4F0 135 aa19.06■□□□□ 0.64
TDP1-206ENST00000553569 SRRM5B3KS81 715 aa19.06■□□□□ 0.64
TDP1-206ENST00000553569 SLC1A7O00341 560 aa19.06■□□□□ 0.64
TDP1-206ENST00000553569 PHF1O43189 567 aaPredicted RBP19.06■□□□□ 0.64
TDP1-206ENST00000553569 AKR7A2O43488 359 aa19.06■□□□□ 0.64
TDP1-206ENST00000553569 ZFPL1O95159 310 aa19.06■□□□□ 0.64
TDP1-206ENST00000553569 WNT2P09544 360 aa19.06■□□□□ 0.64
TDP1-206ENST00000553569 VHLP40337 213 aa19.06■□□□□ 0.64
TDP1-206ENST00000553569 UBE2V2Q15819 145 aa19.06■□□□□ 0.64
TDP1-206ENST00000553569 FAM90A1Q86YD7 464 aa19.06■□□□□ 0.64
TDP1-206ENST00000553569 OR10Z1Q8NGY1 313 aa19.06■□□□□ 0.64
TDP1-206ENST00000553569 GATAD2BQ8WXI9 593 aa19.06■□□□□ 0.64
TDP1-206ENST00000553569 FGGYQ96C11 551 aa19.06■□□□□ 0.64
TDP1-206ENST00000553569 CDC42EP3Q9UKI2 254 aa19.06■□□□□ 0.64
TDP1-206ENST00000553569 SLC7A11Q9UPY5 501 aa19.06■□□□□ 0.64
TDP1-206ENST00000553569 LRCH1Q9Y2L9 728 aa19.06■□□□□ 0.64
TDP1-206ENST00000553569 C2CD3Q4AC94 2353 aa19.06■□□□□ 0.64
TDP1-206ENST00000553569 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.05■□□□□ 0.64
TDP1-206ENST00000553569 ADAM20O43506 726 aa19.05■□□□□ 0.64
TDP1-206ENST00000553569 SERPINA3P01011 423 aa19.05■□□□□ 0.64
TDP1-206ENST00000553569 PCMT1P22061 227 aa19.05■□□□□ 0.64
TDP1-206ENST00000553569 C21orf33P30042 268 aaPredicted RBP19.05■□□□□ 0.64
TDP1-206ENST00000553569 CFHR2P36980 270 aa19.05■□□□□ 0.64
TDP1-206ENST00000553569 HAAOP46952 286 aa19.05■□□□□ 0.64
TDP1-206ENST00000553569 PITPNBP48739 271 aa19.05■□□□□ 0.64
TDP1-206ENST00000553569 GNB2P62879 340 aa19.05■□□□□ 0.64
TDP1-206ENST00000553569 CDK5R1Q15078 307 aa19.05■□□□□ 0.64
TDP1-206ENST00000553569 MICBQ29980 383 aa19.05■□□□□ 0.64
TDP1-206ENST00000553569 CHRFAM7AQ494W8 412 aa19.05■□□□□ 0.64
TDP1-206ENST00000553569 TEX36Q5VZQ5 186 aa19.05■□□□□ 0.64
TDP1-206ENST00000553569 OR52N1Q8NH53 320 aa19.05■□□□□ 0.64
TDP1-206ENST00000553569 TSEN15Q8WW01 171 aaKnown RBP19.05■□□□□ 0.64
TDP1-206ENST00000553569 PP6455Q8WZ26 134 aa19.05■□□□□ 0.64
TDP1-206ENST00000553569 AQP3Q92482 292 aa19.05■□□□□ 0.64
TDP1-206ENST00000553569 C10orf35Q96D05 121 aa19.05■□□□□ 0.64
TDP1-206ENST00000553569 SSBP3Q9BWW4 388 aaPredicted RBP19.05■□□□□ 0.64
TDP1-206ENST00000553569 BEX2Q9BXY8 128 aa19.05■□□□□ 0.64
TDP1-206ENST00000553569 WDR13Q9H1Z4 485 aa19.05■□□□□ 0.64
TDP1-206ENST00000553569 FKBP14Q9NWM8 211 aa19.05■□□□□ 0.64
TDP1-206ENST00000553569 DNAJB11Q9UBS4 358 aa19.05■□□□□ 0.64
TDP1-206ENST00000553569 KIAA1324LA8MWY0 1029 aaPredicted RBP19.04■□□□□ 0.64
TDP1-206ENST00000553569 J3QT63 122 aa19.04■□□□□ 0.64
TDP1-206ENST00000553569 MYL12BO14950 172 aa19.04■□□□□ 0.64
TDP1-206ENST00000553569 HNF1AP20823 631 aa19.04■□□□□ 0.64
TDP1-206ENST00000553569 CNN3Q15417 329 aaKnown RBP19.04■□□□□ 0.64
TDP1-206ENST00000553569 FAHD2BQ6P2I3 314 aaPredicted RBP19.04■□□□□ 0.64
TDP1-206ENST00000553569 RPL22L1Q6P5R6 122 aaKnown RBP19.04■□□□□ 0.64
TDP1-206ENST00000553569 ZNF573Q86YE8 665 aa19.04■□□□□ 0.64
TDP1-206ENST00000553569 FAHD2AQ96GK7 314 aa19.04■□□□□ 0.64
TDP1-206ENST00000553569 CNBD2Q96M20 576 aa19.04■□□□□ 0.64
TDP1-206ENST00000553569 SNTG1Q9NSN8 517 aa19.04■□□□□ 0.64
TDP1-206ENST00000553569 BABAM2Q9NXR7 383 aa19.04■□□□□ 0.64
TDP1-206ENST00000553569 SCN3BQ9NY72 215 aa19.04■□□□□ 0.64
TDP1-206ENST00000553569 CTSZQ9UBR2 303 aa19.04■□□□□ 0.64
TDP1-206ENST00000553569 LPAR3Q9UBY5 353 aa19.04■□□□□ 0.64
TDP1-206ENST00000553569 ANK3Q12955 4377 aaKnown RBP19.04■□□□□ 0.64
TDP1-206ENST00000553569 SETD2Q9BYW2 2564 aaPredicted RBP19.04■□□□□ 0.64
TDP1-206ENST00000553569 A0A0G2JMP0 313 aa19.03■□□□□ 0.64
TDP1-206ENST00000553569 A0A0X1KG70 313 aa19.03■□□□□ 0.64
TDP1-206ENST00000553569 A8MXK9 166 aa19.03■□□□□ 0.64
TDP1-206ENST00000553569 PTGES3LE9PB15 166 aa19.03■□□□□ 0.64
TDP1-206ENST00000553569 SYNGR1O43759 233 aa19.03■□□□□ 0.64
TDP1-206ENST00000553569 LALBAP00709 142 aa19.03■□□□□ 0.64
TDP1-206ENST00000553569 CCDC58Q4VC31 144 aa19.03■□□□□ 0.64
TDP1-206ENST00000553569 DCAF12L2Q5VW00 463 aa19.03■□□□□ 0.64
TDP1-206ENST00000553569 ZFP41Q8N8Y5 198 aa19.03■□□□□ 0.64
TDP1-206ENST00000553569 OR4M2Q8NGB6 313 aa19.03■□□□□ 0.64
TDP1-206ENST00000553569 ZNF671Q8TAW3 534 aa19.03■□□□□ 0.64
TDP1-206ENST00000553569 TECTBQ96PL2 329 aa19.03■□□□□ 0.64
TDP1-206ENST00000553569 CLN8Q9UBY8 286 aa19.03■□□□□ 0.64
TDP1-206ENST00000553569 OR5V1Q9UGF6 321 aa19.03■□□□□ 0.64
TDP1-206ENST00000553569 SIRT4Q9Y6E7 314 aaPredicted RBP19.03■□□□□ 0.64
TDP1-206ENST00000553569 CDK1P06493 297 aa19.02■□□□□ 0.64
TDP1-206ENST00000553569 MUC1P15941 1255 aaPredicted RBP19.02■□□□□ 0.64
TDP1-206ENST00000553569 GLRA1P23415 457 aa19.02■□□□□ 0.64
TDP1-206ENST00000553569 CPT2P23786 658 aa19.02■□□□□ 0.64
TDP1-206ENST00000553569 ANGPTL5Q86XS5 388 aa19.02■□□□□ 0.64
TDP1-206ENST00000553569 BATF2Q8N1L9 274 aa19.02■□□□□ 0.64
TDP1-206ENST00000553569 OR5T2Q8NGG2 359 aa19.02■□□□□ 0.64
TDP1-206ENST00000553569 RGP1Q92546 391 aaPredicted RBP19.02■□□□□ 0.64
TDP1-206ENST00000553569 SGCDQ92629 289 aa19.02■□□□□ 0.64
TDP1-206ENST00000553569 BORCS8Q96FH0 119 aa19.02■□□□□ 0.64
TDP1-206ENST00000553569 POM121Q96HA1 1249 aa19.02■□□□□ 0.64
TDP1-206ENST00000553569 ZNF488Q96MN9 340 aa19.02■□□□□ 0.64
TDP1-206ENST00000553569 DHDHQ9UQ10 334 aa19.02■□□□□ 0.64
TDP1-206ENST00000553569 DOCK11Q5JSL3 2073 aa19.02■□□□□ 0.63
TDP1-206ENST00000553569 WNK2Q9Y3S1 2297 aa19.02■□□□□ 0.63
TDP1-206ENST00000553569 NDUFA2O43678 99 aa19.01■□□□□ 0.63
TDP1-206ENST00000553569 PLATP00750 562 aa19.01■□□□□ 0.63
TDP1-206ENST00000553569 OCM2P0CE71 109 aa19.01■□□□□ 0.63
TDP1-206ENST00000553569 OCMP0CE72 109 aaPredicted RBP19.01■□□□□ 0.63
TDP1-206ENST00000553569 ATF1P18846 271 aa19.01■□□□□ 0.63
TDP1-206ENST00000553569 FUT6P51993 359 aa19.01■□□□□ 0.63
TDP1-206ENST00000553569 UTS2BQ765I0 119 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 201.1 ms