RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ALMS1Q8TCU4 4167 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 IGKV1D-17A0A075B6S4 117 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 TRBV4-1A0A0J9YWV2 114 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 A6NDX4 124 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 FAM90A8PA6NJQ4 464 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 ANKRD30BLA7E2S9 258 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 BBIP1A8MTZ0 92 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 XRCC2O43543 280 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 RENP00797 406 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 NPPAP01160 153 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 ACAA1P09110 424 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-219ENST00000553488 TROVE2P10155 538 aaKnown RBP eCLIP5.84□□□□□ -1.47
ATXN3-219ENST00000553488 DCTDP32321 178 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 DDOSTP39656 456 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 NAA10P41227 235 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-219ENST00000553488 PRKXP51817 358 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 SLC35A2P78381 396 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 ROM1Q03395 351 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 CD69Q07108 199 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 CNN3Q15417 329 aaKnown RBP5.84□□□□□ -1.47
ATXN3-219ENST00000553488 TCTEX1D4Q5JR98 221 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 LDLRAD2Q5SZI1 272 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 PRSS45Q7RTY3 260 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 LHFPL4Q7Z7J7 247 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 TMEM219Q86XT9 240 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 MKXQ8IYA7 352 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 SDR9C7Q8NEX9 313 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 OR5K1Q8NHB7 308 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 ZNRF4Q8WWF5 429 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 HPSE2Q8WWQ2 592 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 TMEM120AQ9BXJ8 343 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 OR52D1Q9H346 318 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 ZMAT4Q9H898 229 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 C19orf12Q9NSK7 152 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 CMTM6Q9NX76 183 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 TAGLN3Q9UI15 199 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 COMMD3-BMI1R4GMX3 469 aa5.84□□□□□ -1.47
ATXN3-219ENST00000553488 A0A1W2PRX2 142 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 TVP23AA6NH52 213 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 ODF3BA8MYP8 253 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 AKR7A2O43488 359 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 ZNF682O95780 498 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 HLA-DQA2P01906 255 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 H1F0P07305 194 aaKnown RBP5.83□□□□□ -1.48
ATXN3-219ENST00000553488 NDUFB7P17568 137 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 HOXD3P31249 432 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-219ENST00000553488 SLC6A6P31641 620 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 PYCR1P32322 319 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 GSK3BP49841 420 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 GMFBP60983 142 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 SPIBQ01892 262 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 BLMHQ13867 455 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 FAM76BQ5HYJ3 339 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 DEFB121Q5J5C9 76 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 FGD3Q5JSP0 725 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 AGBL2Q5U5Z8 902 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 METTL21CQ5VZV1 264 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 RRM2BQ7LG56 351 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 DCXRQ7Z4W1 244 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 CYB561A3Q8NBI2 242 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 ZNRF1Q8ND25 227 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 OR5AN1Q8NGI8 311 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 RPL3LQ92901 407 aaKnown RBP5.83□□□□□ -1.48
ATXN3-219ENST00000553488 SLAMF6Q96DU3 332 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 MED30Q96HR3 178 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 OR5M11Q96RB7 305 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 COPS4Q9BT78 406 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 PAPOLGQ9BWT3 736 aaKnown RBP5.83□□□□□ -1.48
ATXN3-219ENST00000553488 MUC13Q9H3R2 512 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 IFT22Q9H7X7 185 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 INPP5EQ9NRR6 644 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 NDUFAF4Q9P032 175 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 H2AFY2Q9P0M6 372 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-219ENST00000553488 ZNF319Q9P2F9 582 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 NLKQ9UBE8 527 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 RHBDD3Q9Y3P4 386 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 FRAS1Q86XX4 4008 aa5.83□□□□□ -1.48
ATXN3-219ENST00000553488 A0A0G2JND7 137 aa5.82□□□□□ -1.48
ATXN3-219ENST00000553488 TMEM210A6NLX4 147 aa5.82□□□□□ -1.48
ATXN3-219ENST00000553488 OR2AT4A6NND4 320 aa5.82□□□□□ -1.48
ATXN3-219ENST00000553488 ZNF878C9JN71 531 aa5.82□□□□□ -1.48
ATXN3-219ENST00000553488 E9PQ18 207 aa5.82□□□□□ -1.48
ATXN3-219ENST00000553488 H0YAE9 185 aa5.82□□□□□ -1.48
ATXN3-219ENST00000553488 CXCR6O00574 342 aa5.82□□□□□ -1.48
ATXN3-219ENST00000553488 SYNGR1O43759 233 aa5.82□□□□□ -1.48
ATXN3-219ENST00000553488 EDF1O60869 148 aaKnown RBP5.82□□□□□ -1.48
ATXN3-219ENST00000553488 DUS4LO95620 317 aaKnown RBP5.82□□□□□ -1.48
ATXN3-219ENST00000553488 SERPINA1P01009 418 aa5.82□□□□□ -1.48
ATXN3-219ENST00000553488 PF4V1P10720 104 aa5.82□□□□□ -1.48
ATXN3-219ENST00000553488 PSG2P11465 335 aa5.82□□□□□ -1.48
ATXN3-219ENST00000553488 PAICSP22234 425 aaKnown RBP5.82□□□□□ -1.48
ATXN3-219ENST00000553488 COX7A1P24310 79 aa5.82□□□□□ -1.48
ATXN3-219ENST00000553488 ACKR3P25106 362 aa5.82□□□□□ -1.48
ATXN3-219ENST00000553488 RPS19P39019 145 aaKnown RBP5.82□□□□□ -1.48
ATXN3-219ENST00000553488 VDAC2P45880 294 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-219ENST00000553488 CX3CR1P49238 355 aa5.82□□□□□ -1.48
ATXN3-219ENST00000553488 RAB13P51153 203 aa5.82□□□□□ -1.48
ATXN3-219ENST00000553488 BLCAPP62952 87 aa5.82□□□□□ -1.48
ATXN3-219ENST00000553488 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.82□□□□□ -1.48
ATXN3-219ENST00000553488 KLF10Q13118 480 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms